RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 P4HBP07237 508 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 SELPP16109 830 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 ITGB8P26012 769 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RFC2P35250 354 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TXKP42681 527 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TOB1P50616 345 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 PSMC5P62195 406 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 IGBP1P78318 339 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 ADAM17P78536 824 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 SPIRE1Q08AE8 756 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 EVPLQ92817 2033 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 CTAGE1Q96RT6 745 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 RAB34Q9BZG1 259 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TMEM60Q9H2L4 133 aa14.28□□□□□ -0.12
CDK5RAP3-203ENST00000577442 UMODL1Q5DID0 1318 aa14.27□□□□□ -0.12
CDK5RAP3-203ENST00000577442 EML1O00423 815 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PFKMP08237 780 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 QARSP47897 775 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 HIC1Q14526 733 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 XKR3Q5GH77 459 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PSRC1Q6PGN9 363 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 FERMT3Q86UX7 667 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ERMNQ8TAM6 284 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 WNT8AQ9H1J5 351 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PCDHB6Q9Y5E3 794 aa14.27□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ZNF862O60290 1169 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 CKBP12277 381 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ATP4AP20648 1035 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 THPOP40225 353 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PRPHP41219 470 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 CCL23P55773 120 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PTGDRQ13258 359 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 NBR1Q14596 966 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 UGCGQ16739 394 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TRIM71Q2Q1W2 868 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 HAUS3Q68CZ6 603 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 LRRC8DQ7L1W4 858 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 RPAINQ86UA6 219 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 RPUSD2Q8IZ73 545 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 BANK1Q8NDB2 785 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 LXNQ9BS40 222 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ZSCAN16Q9H4T2 348 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 IL23AQ9NPF7 189 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 SEPT9Q9UHD8 586 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 MTMR6Q9Y217 621 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PPME1Q9Y570 386 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 STK24Q9Y6E0 443 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TET1Q8NFU7 2136 aa14.26□□□□□ -0.13
CDK5RAP3-203ENST00000577442 SCN5AQ14524 2016 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 MAGEB2O15479 319 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 IQCF3P0C7M6 154 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 CSF2RAP15509 400 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 RESTQ13127 1097 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 MTHFD1LQ6UB35 978 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 C4orf19Q8IY42 314 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TDHQ8IZJ6 230 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 MTIF3Q9H2K0 278 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 PCDHA2Q9Y5H9 948 aa14.25□□□□□ -0.13
CDK5RAP3-203ENST00000577442 SMIM35A0A1B0GVV1 85 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 POTEMA6NI47 508 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 RSPH10B2B2RC85 870 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 M0QZ92 97 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 RSPH10BP0C881 870 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TECP42680 631 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 CYP4A11Q02928 519 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TBC1D8BQ0IIM8 1120 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 MARCH8Q5T0T0 291 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ZNF618Q5T7W0 954 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ARL6IP4Q66PJ3 421 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 DTHD1Q6ZMT9 781 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 RUFY4Q6ZNE9 571 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 OTUD6AQ7L8S5 288 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TRMT1LQ7Z2T5 733 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 EXOC8Q8IYI6 725 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TRAPPC12Q8WVT3 735 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 WNT8BQ93098 351 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 SCLYQ96I15 445 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 DYDC2Q96IM9 177 aa14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 CCDC43Q96MW1 224 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 EIF2AK1Q9BQI3 630 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 JPH2Q9BR39 696 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 NIFKQ9BYG3 293 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 FAM49AQ9H0Q0 323 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-203ENST00000577442 DDX11L8A8MPP1 907 aa14.23□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ZBTB42B2RXF5 422 aa14.23□□□□□ -0.13
CDK5RAP3-203ENST00000577442 LYPLA2O95372 231 aa14.23□□□□□ -0.13
CDK5RAP3-203ENST00000577442 C22orf31O95567 290 aa14.23□□□□□ -0.13
CDK5RAP3-203ENST00000577442 CTSHP09668 335 aa14.23□□□□□ -0.13
CDK5RAP3-203ENST00000577442 ACTN1P12814 892 aa14.23□□□□□ -0.13
CDK5RAP3-203ENST00000577442 KLRC1P26715 233 aa14.23□□□□□ -0.13
CDK5RAP3-203ENST00000577442 TMOD1P28289 359 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms