RNA–Protein interactions for RNA: ENST00000576346.5

NSF-208, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, human

TSL 4

Gene NSF, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSF-208	ENST00000576346	PPP2R2C	Q9Y2T4	447 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	MYH2	Q9UKX2	1941 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346		A0A1B0GUL6	1792 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	RGPD4	Q7Z3J3	1758 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ZNF804B	A4D1E1	1349 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CCDC151	A5D8V7	595 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	LAD1	O00515	517 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	EIF4EBP3	O60516	100 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	RANBP6	O60518	1105 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	WDHD1	O75717	1129 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	TRPA1	O75762	1119 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	URI1	O94763	535 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CYP19A1	P11511	503 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	MARCKS	P29966	332 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CDC27	P30260	824 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	SARS	P49591	514 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	ARL4D	P49703	201 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	GNAQ	P50148	359 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	LBX1	P52954	281 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	FCGRT	P55899	365 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	PPP2R3A	Q06190	1150 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	TBX2	Q13207	712 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	ORC2	Q13416	577 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	PNOC	Q13519	176 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	RASGRF1	Q13972	1273 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	GRM2	Q14416	872 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	BRD3	Q15059	726 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	TERF2	Q15554	542 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	WHAMMP3	Q1A5X7	153 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	MAP9	Q49MG5	647 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	ARHGAP29	Q52LW3	1261 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CAVIN4	Q5BKX8	364 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	IQCE	Q6IPM2	695 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	GALNT17	Q6IS24	598 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	IGF2-AS	Q6U949	168 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	NXPE4	Q6UWF7	544 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	PI16	Q6UXB8	463 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	PRR23C	Q6ZRP0	262 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CYB5R4	Q7L1T6	521 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	TMTC1	Q8IUR5	882 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	DNAJC10	Q8IXB1	793 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	AMOTL1	Q8IY63	956 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	ZNF34	Q8IZ26	560 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	IFNL3	Q8IZI9	196 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	IL22RA1	Q8N6P7	574 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	MAGEB6	Q8N7X4	407 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	IQUB	Q8NA54	791 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	SMC1B	Q8NDV3	1235 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CCDC148	Q8NFR7	591 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CTCFL	Q8NI51	663 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	NOC3L	Q8WTT2	800 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	BSND	Q8WZ55	320 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	ERCC4	Q92889	916 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CCDC47	Q96A33	483 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	FAM89A	Q96GI7	184 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	MEGF10	Q96KG7	1140 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	RPGRIP1	Q96KN7	1286 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	SETDB2	Q96T68	719 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	POP1	Q99575	1024 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	UTP14A	Q9BVJ6	771 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	C12orf49	Q9H741	205 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	PIH1D3	Q9NQM4	214 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	SH3GLB2	Q9NR46	395 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	CWC15	Q9P013	229 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	MAN1B1	Q9UKM7	699 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	THRAP3	Q9Y2W1	955 aa	Known RBP	4.23	□□□□□ -1.73
NSF-208	ENST00000576346	NFE2L3	Q9Y4A8	694 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	PCDHA5	Q9Y5H7	936 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	MRFAP1	Q9Y605	127 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	SLC4A4	Q9Y6R1	1079 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	MYH13	Q9UKX3	1938 aa		4.23	□□□□□ -1.73
NSF-208	ENST00000576346	TNKS	O95271	1327 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346		A0A096LPE4	126 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TMEM238L	A0A1B0GVL6	79 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346		A0A1W2PPZ6	126 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	CTAGE9	A4FU28	777 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	GSG1L2	A8MUP6	293 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	POLR2D	O15514	142 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PRPF3	O43395	683 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	ORC4	O43929	436 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	MFAP3L	O75121	409 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	IPO7	O95373	1038 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	CHGB	P05060	677 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PNMA6A	P0CW24	399 aa	Predicted RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	ATP1A3	P13637	1013 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	LONP1	P36776	959 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PHKA1	P46020	1223 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	CHMP4BP1	P59074	171 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	GNG11	P61952	73 aa		4.22	□□□□□ -1.73
NSF-208	ENST00000576346	TAGLN	Q01995	201 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	CKAP4	Q07065	602 aa	Known RBP	4.22	□□□□□ -1.73
NSF-208	ENST00000576346	PPARA	Q07869	468 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms