RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 PAGR1Q9BTK6 254 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 PNMA3Q9UL41 463 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 PCDHGC5Q9Y5F6 944 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 SCN11AQ9UI33 1791 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 TJP1Q07157 1748 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 MYH7P12883 1935 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 MGRN1O60291 552 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 MRPL12P52815 198 aaKnown RBP15.82■□□□□ 0.12
SCARF1-209ENST00000576012 MAP2K1Q02750 393 aaPredicted RBP15.82■□□□□ 0.12
SCARF1-209ENST00000576012 KCNH2Q12809 1159 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 ZNF444Q8N0Y2 327 aaPredicted RBP15.82■□□□□ 0.12
SCARF1-209ENST00000576012 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■□□□ 13.2
SCARF1-209ENST00000576012 KCNK9Q9NPC2 374 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 IGF2BP3O00425 579 aaKnown RBP eCLIP15.82■□□□□ 0.12
SCARF1-209ENST00000576012 PPIP5K2O43314 1243 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 CREB1P16220 341 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 SARNPP82979 210 aaKnown RBP15.82■□□□□ 0.12
SCARF1-209ENST00000576012 RNASELQ05823 741 aaKnown RBP15.82■□□□□ 0.12
SCARF1-209ENST00000576012 MTA3Q9BTC8 594 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 IKZF4Q9H2S9 585 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 FGFR1OP2Q9NVK5 253 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 BARHL2Q9NY43 387 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 LAMB4A4D0S4 1761 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 LRP6O75581 1613 aa15.82■□□□□ 0.12
SCARF1-209ENST00000576012 BAZ2AQ9UIF9 1905 aaKnown RBP15.81■□□□□ 0.12
SCARF1-209ENST00000576012 GFPT2O94808 682 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 ALDH5A1P51649 535 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-209ENST00000576012 USP11P51784 963 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 DIXDC1Q155Q3 683 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 UBE2SQ16763 222 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 FAM26FQ5R3K3 315 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 TLDC1Q6P9B6 456 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 LRIG3Q6UXM1 1119 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 C3orf67Q6ZVT6 689 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 ERICH1Q86X53 443 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 PARD3BQ8TEW8 1205 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 SEMA4AQ9H3S1 761 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 BCAS3Q9H6U6 928 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 ARHGEF10LQ9HCE6 1279 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 PPP1R12AO14974 1030 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-209ENST00000576012 MYL1P05976 194 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 COASYQ13057 564 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 KRT79Q5XKE5 535 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 TRPM8Q7Z2W7 1104 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 MAPKAPK5Q8IW41 473 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 GUF1Q8N442 669 aaKnown RBP15.81■□□□□ 0.12
SCARF1-209ENST00000576012 CCDC26Q8TAB7 109 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 FBXO25Q8TCJ0 367 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 BRIP1Q9BX63 1249 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 ECT2Q9H8V3 914 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 DISP2A7MBM2 1401 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 CYP19A1P11511 503 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-209ENST00000576012 DENND2CQ68D51 928 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 BZW1Q7L1Q6 419 aaKnown RBP15.81■□□□□ 0.12
SCARF1-209ENST00000576012 SCFD2Q8WU76 684 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 KLHL29Q96CT2 875 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 FAM129AQ9BZQ8 928 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 ERVK-5Q9HDB9 667 aa15.81■□□□□ 0.12
SCARF1-209ENST00000576012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCARF1-209ENST00000576012 ERMARDQ5T6L9 678 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 THEMIS2Q5TEJ8 643 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 SEPT14Q6ZU15 432 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 CLEC10AQ8IUN9 316 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 PAIP2Q9BPZ3 127 aaKnown RBP15.8■□□□□ 0.12
SCARF1-209ENST00000576012 TMEM47Q9BQJ4 181 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 ZMYND12Q9H0C1 365 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 SWAP70Q9UH65 585 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 CLIC2O15247 247 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 EVI5O60447 810 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 TNIP1Q15025 636 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 DZIP1Q86YF9 867 aaKnown RBP15.8■□□□□ 0.12
SCARF1-209ENST00000576012 TGFBRAP1Q8WUH2 860 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 ZNF570Q96NI8 536 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 SEC63Q9UGP8 760 aaKnown RBP15.8■□□□□ 0.12
SCARF1-209ENST00000576012 NAGPAQ9UK23 515 aa15.8■□□□□ 0.12
SCARF1-209ENST00000576012 MEIS1O00470 390 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 PDHA1P08559 390 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 NR2F2P24468 414 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 MTMR3Q13615 1198 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 REXO1Q8N1G1 1221 aaKnown RBP15.79■□□□□ 0.12
SCARF1-209ENST00000576012 TPCN2Q8NHX9 752 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 NSUN4Q96CB9 384 aaKnown RBP15.79■□□□□ 0.12
SCARF1-209ENST00000576012 FAM84BQ96KN1 310 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-209ENST00000576012 C6orf50Q9HD87 102 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 TBK1Q9UHD2 729 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 AJAP1Q9UKB5 411 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-209ENST00000576012 KIAA1024Q9UPX6 916 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 TRPC6Q9Y210 931 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 C15orf41Q9Y2V0 281 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 H0Y3Z8 333 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 RTN2O75298 545 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 AP1G2O75843 785 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 PLCG2P16885 1265 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 NUGGCQ68CJ6 796 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 CAPRIN2Q6IMN6 1127 aaKnown RBP15.79■□□□□ 0.12
SCARF1-209ENST00000576012 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-209ENST00000576012 ADAM33Q9BZ11 813 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 PCDHB13Q9Y5F0 798 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 TCP11X1B4DZS4 312 aa15.79■□□□□ 0.12
SCARF1-209ENST00000576012 M0R2N6 131 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms