RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 UMODL1Q5DID0 1318 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 IGSF9BQ9UPX0 1349 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 COL1A2P08123 1366 aa17.09■□□□□ 0.33
LITAF-217ENST00000575426 LOXHD1Q8IVV2 1947 aa17.08■□□□□ 0.33
LITAF-217ENST00000575426 EML1O00423 815 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 LAD1O00515 517 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 STX6O43752 255 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 PARNO95453 639 aaKnown RBP17.08■□□□□ 0.32
LITAF-217ENST00000575426 OATP04181 439 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 CKBP12277 381 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 CSF2RAP15509 400 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 ATP4AP20648 1035 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 THPOP40225 353 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 QARSP47897 775 aaKnown RBP17.08■□□□□ 0.32
LITAF-217ENST00000575426 ADAM17P78536 824 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 PTGDRQ13258 359 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 NBR1Q14596 966 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 TAF2Q6P1X5 1199 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 BANK1Q8NDB2 785 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 COLQQ9Y215 455 aaPredicted RBP17.08■□□□□ 0.32
LITAF-217ENST00000575426 MYH15Q9Y2K3 1946 aa17.08■□□□□ 0.32
LITAF-217ENST00000575426 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 RPLP2P05387 115 aaKnown RBP17.07■□□□□ 0.32
LITAF-217ENST00000575426 IQCF3P0C7M6 154 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 SELPP16109 830 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 KLRC1P26715 233 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 RFC2P35250 354 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 TECP42680 631 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 PRKCEQ02156 737 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 UGCGQ16739 394 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 DHX38Q92620 1227 aaKnown RBP17.07■□□□□ 0.32
LITAF-217ENST00000575426 SCLYQ96I15 445 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 RAB34Q9BZG1 259 aa17.07■□□□□ 0.32
LITAF-217ENST00000575426 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.07■□□□□ 0.32
LITAF-217ENST00000575426 MBLAC1A4D2B0 266 aaPredicted RBP17.06■□□□□ 0.32
LITAF-217ENST00000575426 ZNF862O60290 1169 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 CAND2O75155 1236 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 RBL2Q08999 1139 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 XKR3Q5GH77 459 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 MARCH8Q5T0T0 291 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 MTHFD1LQ6UB35 978 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 LRRC8DQ7L1W4 858 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 ERMNQ8TAM6 284 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 NEK9Q8TD19 979 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 TRAPPC12Q8WVT3 735 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 DYDC2Q96IM9 177 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 EIF2AK1Q9BQI3 630 aaKnown RBP17.06■□□□□ 0.32
LITAF-217ENST00000575426 WNT8AQ9H1J5 351 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
LITAF-217ENST00000575426 IL23AQ9NPF7 189 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 SEPT9Q9UHD8 586 aaPredicted RBP17.06■□□□□ 0.32
LITAF-217ENST00000575426 PCDHA2Q9Y5H9 948 aa17.06■□□□□ 0.32
LITAF-217ENST00000575426 A0A1W2PPC1 479 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 RSPH10B2B2RC85 870 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 MAGEB2O15479 319 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 RSPH10BP0C881 870 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 SPIRE1Q08AE8 756 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 TRIM71Q2Q1W2 868 aaKnown RBP17.05■□□□□ 0.32
LITAF-217ENST00000575426 ZNF618Q5T7W0 954 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 DTHD1Q6ZMT9 781 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 OTUD6AQ7L8S5 288 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 DEFB128Q7Z7B8 93 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 TDHQ8IZJ6 230 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 C4orf32Q8N8J7 132 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 DNAJB3Q8WWF6 145 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 FTOQ9C0B1 505 aaKnown RBP eCLIP17.05■□□□□ 0.32
LITAF-217ENST00000575426 ZSWIM4Q9H7M6 989 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 MTMR6Q9Y217 621 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 STK24Q9Y6E0 443 aa17.05■□□□□ 0.32
LITAF-217ENST00000575426 SMIM35A0A1B0GVV1 85 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 POTEMA6NI47 508 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 M0QZ92 97 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 BMP15O95972 392 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 FGBP02675 491 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 PFKMP08237 780 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 ACRP10323 421 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 TMOD1P28289 359 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 PRPHP41219 470 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 CYP4A11Q02928 519 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
LITAF-217ENST00000575426 MTERF2Q49AM1 385 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 PSRC1Q6PGN9 363 aaPredicted RBP17.04■□□□□ 0.32
LITAF-217ENST00000575426 RUFY4Q6ZNE9 571 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 C4orf19Q8IY42 314 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 NME8Q8N427 588 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 WNT8BQ93098 351 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 LXNQ9BS40 222 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
LITAF-217ENST00000575426 FAM49AQ9H0Q0 323 aaPredicted RBP17.04■□□□□ 0.32
LITAF-217ENST00000575426 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 ARID2Q68CP9 1835 aa17.04■□□□□ 0.32
LITAF-217ENST00000575426 ACTN1P12814 892 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
LITAF-217ENST00000575426 TBC1D8BQ0IIM8 1120 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 RESTQ13127 1097 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 PDIA5Q14554 519 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 IER5Q5VY09 327 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms