RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.41
EDC4-207ENST00000573992 CENPTQ96BT3 561 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 OPTNQ96CV9 577 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 PABPC3Q9H361 631 aaKnown RBP12.46□□□□□ -0.41
EDC4-207ENST00000573992 USP40Q9NVE5 1235 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 FAM187AA6NFU0 413 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 LAD1O00515 517 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 GCLCP48506 637 aaPredicted RBP12.46□□□□□ -0.41
EDC4-207ENST00000573992 USP11P51784 963 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 RCAN1P53805 252 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 SCARF1Q14162 830 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 HSP90AA5PQ58FG0 334 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 OLFM3Q96PB7 478 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 GORASP1Q9BQQ3 440 aa12.46□□□□□ -0.41
EDC4-207ENST00000573992 ZC3H4Q9UPT8 1303 aaKnown RBP12.46□□□□□ -0.41
EDC4-207ENST00000573992 USP31Q70CQ4 1352 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 PRKAB2O43741 272 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 FCER1AP12319 257 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 VHLP40337 213 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 RFC5P40937 340 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 SEPT6Q14141 434 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 EXOC3L4Q17RC7 722 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 FAM26FQ5R3K3 315 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 TTI2Q6NXR4 508 aa12.46□□□□□ -0.42
EDC4-207ENST00000573992 GYG2O15488 501 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 XRCC5P13010 732 aaKnown RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 VPS41P49754 854 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 STK4Q13043 487 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 ADAM9Q13443 819 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 PUM3Q15397 648 aaKnown RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 CRNKL1Q9BZJ0 848 aaKnown RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 PDP2Q9P2J9 529 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 PPLO60437 1756 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 RICTORQ6R327 1708 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 TMEM120BA0PK00 339 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 H7C1W4 665 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 O00370 1275 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 RTN2O75298 545 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 DDAH1O94760 285 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 CALB2P22676 271 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 TPP2P29144 1249 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 PHKA1P46020 1223 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 PMS1P54277 932 aaKnown RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 DEUP1Q05D60 604 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 ZNF268Q14587 947 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 CAVIN4Q5BKX8 364 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 TMC3Q7Z5M5 1100 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 SRRM1Q8IYB3 904 aaKnown RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 RAB3IL1Q8TBN0 382 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 ZNF507Q8TCN5 953 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 GOLPH3Q9H4A6 298 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 RXFP1Q9HBX9 757 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 PIH1D3Q9NQM4 214 aaKnown RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 FAF1Q9UNN5 650 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 DPPA5A6NC42 116 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 MAGEA13PA6NCF6 341 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 FGFR4P22455 802 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 MCAMP43121 646 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 RAB27AP51159 221 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 TRADDQ15628 312 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 SDCCAG8Q86SQ7 713 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 SDR42E1Q8WUS8 393 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 CEP63Q96MT8 703 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 RPS6KC1Q96S38 1066 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 LBHD1Q9BQE6 289 aaPredicted RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 PHF20Q9BVI0 1012 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 TYW1Q9NV66 732 aaKnown RBP12.45□□□□□ -0.42
EDC4-207ENST00000573992 ANKIB1Q9P2G1 1089 aa12.45□□□□□ -0.42
EDC4-207ENST00000573992 TBCAO75347 108 aaKnown RBP12.44□□□□□ -0.42
EDC4-207ENST00000573992 ACADSP16219 412 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 KIAA1755Q5JYT7 1200 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 TRIM74Q86UV6 250 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 TRIM73Q86UV7 250 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 LARP4BQ92615 738 aaKnown RBP12.44□□□□□ -0.42
EDC4-207ENST00000573992 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 RNPEPL1Q9HAU8 725 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 RHBDL2Q9NX52 303 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.44□□□□□ -0.42
EDC4-207ENST00000573992 UPP2O95045 317 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 STARD3NLO95772 234 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 MEI1Q5TIA1 1274 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 PDXDC2PQ6P474 469 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 DTX3LQ8TDB6 740 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 ACSBG1Q96GR2 724 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 CCDC87Q9NVE4 849 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 ZFP69BQ9UJL9 534 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
EDC4-207ENST00000573992 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 IRF6O14896 467 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 SNX3O60493 162 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 KRT16P08779 473 aa12.44□□□□□ -0.42
EDC4-207ENST00000573992 ADCY8P40145 1251 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms