RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 C5orf67F2Z3F1 127 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 M0QZ92 97 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 DDX39AO00148 427 aaKnown RBP16.27■□□□□ 0.2
TVP23A-208ENST00000573857 ADAMTS3O15072 1205 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 CYP3A4P08684 503 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 COL9A1P20849 921 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 KCNA5P22460 613 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 CTNNB1P35222 781 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 TMEM62Q0P6H9 643 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 LEXMQ3ZCV2 418 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 PLA2G4DQ86XP0 818 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 FBXL16Q8N461 479 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 BANK1Q8NDB2 785 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 LINC01599Q8WXQ3 324 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 ZMYND12Q9H0C1 365 aa16.27■□□□□ 0.2
TVP23A-208ENST00000573857 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 SMIM35A0A1B0GVV1 85 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 IPO5O00410 1097 aaKnown RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 BACH1O14867 736 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 BMPR1AP36894 532 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 PKN1Q16512 942 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 MTHFD1LQ6UB35 978 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 CCDC60Q8IWA6 550 aaPredicted RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 REXO1Q8N1G1 1221 aaKnown RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 ATP8B4Q8TF62 1192 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 CLP1Q92989 425 aaKnown RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 ZNF689Q96CS4 500 aaPredicted RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 FTHL17Q9BXU8 183 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
TVP23A-208ENST00000573857 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 RWDD3Q9Y3V2 267 aa16.26■□□□□ 0.19
TVP23A-208ENST00000573857 KDM3AQ9Y4C1 1321 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 TTC3P53804 2025 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 PRPF3O43395 683 aaKnown RBP16.25■□□□□ 0.19
TVP23A-208ENST00000573857 HBP1O60381 514 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 DGKIO75912 1065 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 RB1P06400 928 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 KLRC1P26715 233 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
TVP23A-208ENST00000573857 KRT76Q01546 638 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 PAK2Q13177 524 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 TCEAL5Q5H9L2 206 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 MIS18BP1Q6P0N0 1132 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 PDXDC2PQ6P474 469 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 RTN4RL1Q86UN2 441 aaPredicted RBP16.25■□□□□ 0.19
TVP23A-208ENST00000573857 CRIPAKQ8N1N5 446 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 NME8Q8N427 588 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
TVP23A-208ENST00000573857 PHKBQ93100 1093 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 UIMC1Q96RL1 719 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 ZNF577Q9BSK1 485 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 C1QTNF1Q9BXJ1 281 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 NSUN3Q9H649 340 aaKnown RBP16.25■□□□□ 0.19
TVP23A-208ENST00000573857 ZNF302Q9NR11 478 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 PADI3Q9ULW8 664 aa16.25■□□□□ 0.19
TVP23A-208ENST00000573857 ZBTB42B2RXF5 422 aa16.24■□□□□ 0.19
TVP23A-208ENST00000573857 BTG3Q14201 252 aaPredicted RBP16.24■□□□□ 0.19
TVP23A-208ENST00000573857 COL19A1Q14993 1142 aa16.24■□□□□ 0.19
TVP23A-208ENST00000573857 SWSAP1Q6NVH7 229 aa16.24■□□□□ 0.19
TVP23A-208ENST00000573857 NPAS4Q8IUM7 802 aa16.24■□□□□ 0.19
TVP23A-208ENST00000573857 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
TVP23A-208ENST00000573857 TBC1D22BQ9NU19 505 aa16.24■□□□□ 0.19
TVP23A-208ENST00000573857 RALGAPA2Q2PPJ7 1873 aa16.24■□□□□ 0.19
TVP23A-208ENST00000573857 COL1A2P08123 1366 aa16.24■□□□□ 0.19
TVP23A-208ENST00000573857 MYO7AQ13402 2215 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 NLRC5Q86WI3 1866 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 GRM6O15303 877 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 REC8O95072 547 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 PSMA5P28066 241 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 GNA11P29992 359 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 AKAP17AQ02040 695 aaKnown RBP16.23■□□□□ 0.19
TVP23A-208ENST00000573857 NTRK3Q16288 839 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 ZNF484Q5JVG2 852 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 PTCRAQ6ISU1 281 aaPredicted RBP16.23■□□□□ 0.19
TVP23A-208ENST00000573857 ZNF746Q6NUN9 644 aaPredicted RBP16.23■□□□□ 0.19
TVP23A-208ENST00000573857 KIAA0319LQ8IZA0 1049 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 NEK9Q8TD19 979 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 RASGRP4Q8TDF6 673 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 LMAN2LQ9H0V9 348 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 TMX1Q9H3N1 280 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 CD320Q9NPF0 282 aa16.23■□□□□ 0.19
TVP23A-208ENST00000573857 C5orf42Q9H799 3197 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 H3BQ06 376 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-208ENST00000573857 PPFIA3O75145 1194 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 STAG3L1P0CL83 205 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 IFNAR1P17181 557 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 ATP4AP20648 1035 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 CIITAP33076 1130 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 EVCP57679 992 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 TMEM266Q2M3C6 531 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 PRR16Q569H4 304 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms