RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 BMP2KLQ5H9B9 411 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 IER5Q5VY09 327 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 SYNE3Q6ZMZ3 975 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 TEX2Q8IWB9 1127 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 SDF4Q9BRK5 362 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 CLDND1Q9NY35 253 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 PADI3Q9ULW8 664 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 V9GY48 417 aaPredicted RBP25.1■■□□□ 1.61
SNF8-216ENST00000573795 IGKV6D-21A0A0A0MT36 114 aa25.09■■□□□ 1.61
SNF8-216ENST00000573795 ZBTB43O43298 467 aa25.09■■□□□ 1.61
SNF8-216ENST00000573795 CCNE2O96020 404 aa25.09■■□□□ 1.61
SNF8-216ENST00000573795 FOSP01100 380 aaPredicted RBP25.09■■□□□ 1.61
SNF8-216ENST00000573795 CDC27P30260 824 aa25.09■■□□□ 1.61
SNF8-216ENST00000573795 DLX2Q07687 328 aaPredicted RBP25.09■■□□□ 1.61
SNF8-216ENST00000573795 DHX32Q7L7V1 743 aaKnown RBP25.09■■□□□ 1.61
SNF8-216ENST00000573795 BARHL2Q9NY43 387 aa25.09■■□□□ 1.61
SNF8-216ENST00000573795 ARIH1Q9Y4X5 557 aaPredicted RBP25.09■■□□□ 1.61
SNF8-216ENST00000573795 MRPL42Q9Y6G3 142 aaKnown RBP25.09■■□□□ 1.61
SNF8-216ENST00000573795 SMIM35A0A1B0GVV1 85 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 SMCO2A6NFE2 343 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 MMP1P03956 469 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 SSTR3P32745 418 aaPredicted RBP25.08■■□□□ 1.61
SNF8-216ENST00000573795 ZP2Q05996 745 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 TSGA10IPQ3SY00 556 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 RNF20Q5VTR2 975 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 MTHFD1LQ6UB35 978 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 EP400NLQ6ZTU2 488 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 FTHL17Q9BXU8 183 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 CELF4Q9BZC1 486 aaKnown RBP25.08■■□□□ 1.61
SNF8-216ENST00000573795 TMX1Q9H3N1 280 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 HCN4Q9Y3Q4 1203 aa25.08■■□□□ 1.61
SNF8-216ENST00000573795 KDM3AQ9Y4C1 1321 aa25.08■■□□□ 1.6
SNF8-216ENST00000573795 hCG_1984214I3L0E3 225 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 ADAMTS3O15072 1205 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 GTF2F1P35269 517 aaKnown RBP eCLIP25.07■■□□□ 1.6
SNF8-216ENST00000573795 AP3B2Q13367 1082 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 ABHD15Q6UXT9 468 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 NPAS4Q8IUM7 802 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 CMTR2Q8IYT2 770 aaKnown RBP25.07■■□□□ 1.6
SNF8-216ENST00000573795 ZNF713Q8N859 430 aaPredicted RBP25.07■■□□□ 1.6
SNF8-216ENST00000573795 CRYGNQ8WXF5 182 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 PLVAPQ9BX97 442 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 ALG13Q9NP73 1137 aaKnown RBP25.07■■□□□ 1.6
SNF8-216ENST00000573795 PLAGL2Q9UPG8 496 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 TRIOO75962 3097 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 EVPLQ92817 2033 aa25.07■■□□□ 1.6
SNF8-216ENST00000573795 PLXNA4Q9HCM2 1894 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 KLF18A0A0U1RQI7 1052 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 GOLGA8AA7E2F4 631 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 GOLGA8BA8MQT2 603 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 FAM86B1E9PN63 330 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 CSPG5O95196 566 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 FAM86B2P0C5J1 330 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 DNAJB1P25685 340 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 PAK2Q13177 524 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 NIPA1Q7RTP0 329 aa25.06■■□□□ 1.6
SNF8-216ENST00000573795 CCDC60Q8IWA6 550 aaPredicted RBP25.06■■□□□ 1.6
SNF8-216ENST00000573795 FNDC1Q4ZHG4 1894 aaPredicted RBP25.05■■□□□ 1.6
SNF8-216ENST00000573795 IGLV3-22A0A075B6J6 115 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 C19orf67A6NJJ6 358 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 M0QZ92 97 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 DDX39AO00148 427 aaKnown RBP25.05■■□□□ 1.6
SNF8-216ENST00000573795 DHX15O43143 795 aaKnown RBP25.05■■□□□ 1.6
SNF8-216ENST00000573795 NCK2O43639 380 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 TBX10O75333 385 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 GATMP50440 423 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 TMEM266Q2M3C6 531 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 TNPO1Q92973 898 aaKnown RBP25.05■■□□□ 1.6
SNF8-216ENST00000573795 P2RX5Q93086 422 aa25.05■■□□□ 1.6
SNF8-216ENST00000573795 ZBTB42B2RXF5 422 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 LINC01565O15544 149 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 MGEA5O60502 916 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 ITGB1P05556 798 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 SCG2P13521 617 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 SLC26A2P50443 739 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 KRT76Q01546 638 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 PAN2Q504Q3 1202 aaKnown RBP25.04■■□□□ 1.6
SNF8-216ENST00000573795 NME8Q8N427 588 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 ATP8B4Q8TF62 1192 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 CDHR5Q9HBB8 845 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 PRKAG3Q9UGI9 489 aa25.04■■□□□ 1.6
SNF8-216ENST00000573795 PRR33A8MZF0 331 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 ATP4AP20648 1035 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 KLRC1P26715 233 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 ADD1P35611 737 aaKnown RBP25.03■■□□□ 1.6
SNF8-216ENST00000573795 RCAN1P53805 252 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 CLUL1Q15846 466 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 JAKMIP3Q5VZ66 844 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 ADHFE1Q8IWW8 467 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 SPPL3Q8TCT6 385 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 TMEM40Q8WWA1 233 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 ERVK-5Q9HDB9 667 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 WDR81Q562E7 1941 aa25.03■■□□□ 1.6
SNF8-216ENST00000573795 MUC6Q6W4X9 2439 aa25.02■■□□□ 1.6
SNF8-216ENST00000573795 MBTPS2O43462 519 aa25.02■■□□□ 1.6
SNF8-216ENST00000573795 HBP1O60381 514 aa25.02■■□□□ 1.6
SNF8-216ENST00000573795 CPA1P15085 419 aa25.02■■□□□ 1.6
SNF8-216ENST00000573795 HOXD11P31277 338 aaPredicted RBP25.02■■□□□ 1.6
SNF8-216ENST00000573795 IRS1P35568 1242 aa25.02■■□□□ 1.6
SNF8-216ENST00000573795 SMAD2Q15796 467 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms