RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CNPY1Q3B7I2 92 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 ZNF569Q5MCW4 686 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 TBC1D1Q86TI0 1168 aaPredicted RBP11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 VPS37DQ86XT2 251 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 CCDC110Q8TBZ0 833 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 USP6NLQ92738 828 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 TMEM87BQ96K49 555 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 PANX2Q96RD6 677 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 MRPL44Q9H9J2 332 aaKnown RBP11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 PARVBQ9HBI1 364 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 AS3MTQ9HBK9 375 aa11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 FAM32AQ9Y421 112 aaKnown RBP11.4□□□□□ -0.58
CHRNB1-205ENST00000573209 STK36Q9NRP7 1315 aa11.4□□□□□ -0.59
CHRNB1-205ENST00000573209 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 ZAP70P43403 619 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 METAP2P50579 478 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 RESP18Q5W5W9 173 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SND1Q7KZF4 910 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SKA1Q96BD8 255 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 PUS7LQ9H0K6 701 aaKnown RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 AASDHPPTQ9NRN7 309 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 EURLQ9NYK6 297 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 MTUS1Q9ULD2 1270 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 TTC7AQ9ULT0 858 aaPredicted RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 ITIH6Q6UXX5 1313 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 NID2Q14112 1375 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SH2B2O14492 632 aaPredicted RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 PRPF3O43395 683 aaKnown RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 CSF1RP07333 972 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 TGFB3P10600 412 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SKIP12755 728 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SCG2P13521 617 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 GNAT2P19087 354 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 ADD2P35612 726 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 CFAP58Q5T655 872 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 RASIP1Q5U651 963 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 DCLK2Q8N568 766 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 GFM2Q969S9 779 aaKnown RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 GPR101Q96P66 508 aaPredicted RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SPATA16Q9BXB7 569 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 HSD3B7Q9H2F3 369 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 TPK1Q9H3S4 243 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 ARHGEF38Q9NXL2 777 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SCHIP1Q9P0W5 487 aaPredicted RBP11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 TSC22D4Q9Y3Q8 395 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
CHRNB1-205ENST00000573209 SPECC1L-ADORA2AF8WAN1 911 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 TEX28O15482 410 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 TRAPPC3O43617 180 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 CLASP2O75122 1294 aaKnown RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 A1BGP04217 495 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 PYGMP11217 842 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 LMOD1P29536 600 aaPredicted RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 KIF11P52732 1056 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 UBASH3AP57075 661 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 POU5F1Q01860 360 aaKnown RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 PTPAQ15257 358 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 CCDC102BQ68D86 513 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 EMBQ6PCB8 327 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 OLFM4Q6UX06 510 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 ANKS4BQ8N8V4 417 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 VMP1Q96GC9 406 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 CEP295NLQ96MC4 621 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 GDAP1L1Q96MZ0 367 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 SPATA31A3Q5VYP0 1347 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 PLCH1Q4KWH8 1693 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 IFIT3O14879 490 aaKnown RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 LCA5LO95447 670 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 ERCC5P28715 1186 aaPredicted RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 ADARP55265 1226 aaKnown RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 IFIT5Q13325 482 aaKnown RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 TRIM29Q14134 588 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 SCARF1Q14162 830 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 DAB2IPQ5VWQ8 1189 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 KRT40Q6A162 431 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 APOA5Q6Q788 366 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 NLRP9Q7RTR0 991 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 SPICE1Q8N0Z3 855 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 CCDC42Q96M95 316 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 PPANQ9NQ55 473 aaKnown RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 ABCF3Q9NUQ8 709 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 LARSQ9P2J5 1176 aaKnown RBP11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 PCDHB2Q9Y5E7 798 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 HEY1Q9Y5J3 304 aa11.38□□□□□ -0.59
CHRNB1-205ENST00000573209 WNT7AO00755 349 aa11.37□□□□□ -0.59
CHRNB1-205ENST00000573209 TACC1O75410 805 aa11.37□□□□□ -0.59
CHRNB1-205ENST00000573209 GNAZP19086 355 aa11.37□□□□□ -0.59
CHRNB1-205ENST00000573209 POLR2EP19388 210 aaKnown RBP11.37□□□□□ -0.59
CHRNB1-205ENST00000573209 ALDH5A1P51649 535 aaPredicted RBP11.37□□□□□ -0.59
CHRNB1-205ENST00000573209 EPHB4P54760 987 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms