RNA–Protein interactions for RNA: ENST00000573123.1

CXCL16-202, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS ALT2 TSL 2

Gene CXCL16, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-202ENST00000573123 PABPC5Q96DU9 382 aaKnown RBP20.17■□□□□ 0.82
CXCL16-202ENST00000573123 AGO3Q9H9G7 860 aaKnown RBP20.17■□□□□ 0.82
CXCL16-202ENST00000573123 TMEM260Q9NX78 707 aa20.17■□□□□ 0.82
CXCL16-202ENST00000573123 ESYT2A0FGR8 921 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 DDX39AO00148 427 aaKnown RBP20.16■□□□□ 0.82
CXCL16-202ENST00000573123 HBP1O60381 514 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 STAG3L1P0CL83 205 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 SCG2P13521 617 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
CXCL16-202ENST00000573123 JAKMIP3Q5VZ66 844 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 SKAP1Q86WV1 359 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 PLA2G4DQ86XP0 818 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 NPAS4Q8IUM7 802 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 NEK9Q8TD19 979 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 TRAPPC12Q8WVT3 735 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 ZNF689Q96CS4 500 aaPredicted RBP20.16■□□□□ 0.82
CXCL16-202ENST00000573123 ZBTB10Q96DT7 871 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 PLVAPQ9BX97 442 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
CXCL16-202ENST00000573123 C6orf50Q9HD87 102 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 FAM217BQ9NTX9 383 aaPredicted RBP20.16■□□□□ 0.82
CXCL16-202ENST00000573123 TCEAL9Q9UHQ7 104 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 IGSF9BQ9UPX0 1349 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 KDM3AQ9Y4C1 1321 aa20.16■□□□□ 0.82
CXCL16-202ENST00000573123 IGKV6D-21A0A0A0MT36 114 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 DGKIO75912 1065 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 KRT76Q01546 638 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 TMEM62Q0P6H9 643 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 TMEM31Q5JXX7 168 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 MIS18BP1Q6P0N0 1132 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 MTHFD1LQ6UB35 978 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 ABHD15Q6UXT9 468 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 EP400NLQ6ZTU2 488 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 FAM178BQ8IXR5 827 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 CMTR2Q8IYT2 770 aaKnown RBP20.15■□□□□ 0.82
CXCL16-202ENST00000573123 GJD3Q8N144 294 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 ATP8B4Q8TF62 1192 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 EPHX3Q9H6B9 360 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 ZNF302Q9NR11 478 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 PADI3Q9ULW8 664 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 COL1A2P08123 1366 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 RALGAPA2Q2PPJ7 1873 aa20.15■□□□□ 0.82
CXCL16-202ENST00000573123 GRXCR2A6NFK2 248 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 H3BQ06 376 aaPredicted RBP20.14■□□□□ 0.81
CXCL16-202ENST00000573123 CCNE2O96020 404 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 CYP3A4P08684 503 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 IL9P15248 144 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 GNA11P29992 359 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 SSTR3P32745 418 aaPredicted RBP20.14■□□□□ 0.81
CXCL16-202ENST00000573123 ADD1P35611 737 aaKnown RBP20.14■□□□□ 0.81
CXCL16-202ENST00000573123 AKAP17AQ02040 695 aaKnown RBP20.14■□□□□ 0.81
CXCL16-202ENST00000573123 COL19A1Q14993 1142 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 ZNF484Q5JVG2 852 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 ODR4Q5SWX8 454 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 PDXDC2PQ6P474 469 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 BLOC1S2Q6QNY1 142 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 REXO1Q8N1G1 1221 aaKnown RBP20.14■□□□□ 0.81
CXCL16-202ENST00000573123 LINC01599Q8WXQ3 324 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 JAKMIP1Q96N16 626 aaKnown RBP20.14■□□□□ 0.81
CXCL16-202ENST00000573123 TBC1D22BQ9NU19 505 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
CXCL16-202ENST00000573123 CLDND1Q9NY35 253 aa20.14■□□□□ 0.81
CXCL16-202ENST00000573123 NID2Q14112 1375 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 FAM86B1E9PN63 330 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 IPO5O00410 1097 aaKnown RBP20.13■□□□□ 0.81
CXCL16-202ENST00000573123 GRM6O15303 877 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 FAM86B2P0C5J1 330 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 LINC00271P0C7V0 271 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 APOBRQ0VD83 1088 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 NAALADL2Q58DX5 795 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 Q6ZUG5 572 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 CCDC60Q8IWA6 550 aaPredicted RBP20.13■□□□□ 0.81
CXCL16-202ENST00000573123 BICD2Q8TD16 824 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 KCNB2Q92953 911 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 BRF1Q92994 677 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 PPP2R3CQ969Q6 453 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 ZNF577Q9BSK1 485 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 ZMYND12Q9H0C1 365 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 RAPGEFL1Q9UHV5 662 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 LRFN2Q9ULH4 789 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 TTC3P53804 2025 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 NLRC5Q86WI3 1866 aa20.13■□□□□ 0.81
CXCL16-202ENST00000573123 MMP1P03956 469 aa20.12■□□□□ 0.81
CXCL16-202ENST00000573123 KLRC1P26715 233 aa20.12■□□□□ 0.81
CXCL16-202ENST00000573123 ZNF746Q6NUN9 644 aaPredicted RBP20.12■□□□□ 0.81
CXCL16-202ENST00000573123 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
CXCL16-202ENST00000573123 CCDC148Q8NFR7 591 aa20.12■□□□□ 0.81
CXCL16-202ENST00000573123 P2RX5Q93086 422 aa20.12■□□□□ 0.81
CXCL16-202ENST00000573123 LRFN3Q9BTN0 628 aa20.12■□□□□ 0.81
CXCL16-202ENST00000573123 HCN4Q9Y3Q4 1203 aa20.12■□□□□ 0.81
CXCL16-202ENST00000573123 IGLV3-22A0A075B6J6 115 aa20.11■□□□□ 0.81
CXCL16-202ENST00000573123 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
CXCL16-202ENST00000573123 PRPF3O43395 683 aaKnown RBP20.11■□□□□ 0.81
CXCL16-202ENST00000573123 CPA1P15085 419 aa20.11■□□□□ 0.81
CXCL16-202ENST00000573123 HSPA4P34932 840 aa20.11■□□□□ 0.81
CXCL16-202ENST00000573123 SWSAP1Q6NVH7 229 aa20.11■□□□□ 0.81
CXCL16-202ENST00000573123 RTN4RL1Q86UN2 441 aaPredicted RBP20.11■□□□□ 0.81
CXCL16-202ENST00000573123 SMAP1Q8IYB5 467 aaPredicted RBP20.11■□□□□ 0.81
CXCL16-202ENST00000573123 CRYGNQ8WXF5 182 aa20.11■□□□□ 0.81
CXCL16-202ENST00000573123 GINS2Q9Y248 185 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms