RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 SP2Q02086 613 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 UBXN1Q04323 297 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 ZNF746Q6NUN9 644 aaPredicted RBP13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 PADI6Q6TGC4 694 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 FAM114A1Q8IWE2 563 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 BRI3BPQ8WY22 251 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 CDHR1Q96JP9 859 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 KCTD10Q9H3F6 313 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 MRPL44Q9H9J2 332 aaKnown RBP13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 LRRC37A2A6NM11 1700 aa13.31□□□□□ -0.28
TOM1L1-213ENST00000572405 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 EIF3JO75822 258 aaKnown RBP13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 PRPF6O94906 941 aaKnown RBP13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 GCNT3O95395 438 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 CETPP11597 493 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 YWHABP31946 246 aaKnown RBP13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 PSMC5P62195 406 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 FKBP1BP68106 108 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 MAEAQ7L5Y9 396 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 EPM2AIP1Q7L775 607 aaPredicted RBP13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 MYCT1Q8N699 235 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 C2orf69Q8N8R5 385 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 PORCNQ9H237 461 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 PARVGQ9HBI0 331 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 UNCXA6NJT0 531 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 HIP1RO75146 1068 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 LYPLA2O95372 231 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 GAP43P17677 238 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 EDNRBP24530 442 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 HOXD13P35453 343 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 GTF2A2P52657 109 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 EEPD1Q7L9B9 569 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 TC2NQ8N9U0 490 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 FGD4Q96M96 766 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 OLFML3Q9NRN5 406 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 SPTLC3Q9NUV7 552 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 KCND2Q9NZV8 630 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 SLC9A2Q9UBY0 812 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 NFASCO94856 1347 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 WDR81Q562E7 1941 aa13.3□□□□□ -0.28
TOM1L1-213ENST00000572405 BACH1O14867 736 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 GYPCP04921 128 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 ZNF131P52739 623 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 ACTR2P61160 394 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 RBL2Q08999 1139 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 KCNA1Q09470 495 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 MAPK7Q13164 816 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 MIIPQ5JXC2 388 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 C4orf19Q8IY42 314 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 DAW1Q8N136 415 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 CPLX3Q8WVH0 158 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 MMP19Q99542 508 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 SENP7Q9BQF6 1050 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 EFCC1Q9HA90 598 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 GABBR1Q9UBS5 961 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 DBR1Q9UK59 544 aaKnown RBP13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 MYH11P35749 1972 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 KIF20AO95235 890 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 COPB2P35606 906 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 NPEPPSP55786 919 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 KCTD2Q14681 263 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 CST9Q5W186 159 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 CYFIP1Q7L576 1253 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 SMAP1Q8IYB5 467 aaPredicted RBP13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 ANKRD13CQ8N6S4 541 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 RDM1Q8NG50 284 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 ZNF507Q8TCN5 953 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 FIZ1Q96SL8 496 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 NOC4LQ9BVI4 516 aaKnown RBP13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 ODF2LQ9ULJ1 636 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 ITIH6Q6UXX5 1313 aa13.29□□□□□ -0.28
TOM1L1-213ENST00000572405 ZNF862O60290 1169 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 UBA1P22314 1058 aaKnown RBP13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 ICAM3P32942 547 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 KNOP1Q1ED39 458 aaKnown RBP13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 ZC2HC1CQ53FD0 456 aaPredicted RBP13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 ODR4Q5SWX8 454 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 SPRYD7Q5W111 196 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 SWSAP1Q6NVH7 229 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 FOXR2Q6PJQ5 311 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 PPFIBP1Q86W92 1011 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 TMEM139Q8IV31 216 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 KSR1Q8IVT5 923 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 IKZF4Q9H2S9 585 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 MCM3APO60318 1980 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 DNAJC25-GNG10A0A024R161 153 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 USP27XA6NNY8 438 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 CASP14P31944 242 aa13.28□□□□□ -0.28
TOM1L1-213ENST00000572405 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms