RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 FAM83BQ5T0W9 1011 aa21.63■■□□□ 1.05
SPNS2-203ENST00000570979 CCDC170Q8IYT3 715 aa21.63■■□□□ 1.05
SPNS2-203ENST00000570979 NUDT12Q9BQG2 462 aa21.63■■□□□ 1.05
SPNS2-203ENST00000570979 TMOD4Q9NZQ9 345 aa21.63■■□□□ 1.05
SPNS2-203ENST00000570979 SOWAHDA6NJG2 315 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 C19orf81C9J6K1 198 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 SSBP05455 408 aaKnown RBP eCLIP21.62■■□□□ 1.05
SPNS2-203ENST00000570979 CYLC1P35663 651 aaPredicted RBP21.62■■□□□ 1.05
SPNS2-203ENST00000570979 SETQ01105 290 aaPredicted RBP21.62■■□□□ 1.05
SPNS2-203ENST00000570979 GABPB1Q06547 395 aaPredicted RBP21.62■■□□□ 1.05
SPNS2-203ENST00000570979 FAM110CQ1W6H9 321 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 VWA3BQ502W6 1294 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 GPBP1Q86WP2 473 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 MNS1Q8NEH6 495 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 RAET1EQ8TD07 263 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 ACER1Q8TDN7 264 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 BBXQ8WY36 941 aaPredicted RBP21.62■■□□□ 1.05
SPNS2-203ENST00000570979 TUFT1Q9NNX1 390 aa21.62■■□□□ 1.05
SPNS2-203ENST00000570979 COBLO75128 1261 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 FAM193AP78312 1265 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 NCBP1Q09161 790 aaKnown RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 PABPC4Q13310 644 aaKnown RBP eCLIP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 MTFR1Q15390 333 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 ZYXQ15942 572 aaKnown RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 MCF2L2Q86YR7 1114 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 SPICE1Q8N0Z3 855 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 TXLNBQ8N3L3 684 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 SYT2Q8N9I0 419 aaPredicted RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 PCMTD1Q96MG8 357 aaPredicted RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 P2RX7Q99572 595 aaKnown RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 ZNF215Q9UL58 517 aaPredicted RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 TTC26A0AVF1 554 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 B4DLN1 442 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 URI1O94763 535 aaPredicted RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 RAD9BQ6WBX8 426 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 ZNF662Q6ZS27 426 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 EHBP1Q8NDI1 1231 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 WDR11Q9BZH6 1224 aa21.61■■□□□ 1.05
SPNS2-203ENST00000570979 NUCKS1Q9H1E3 243 aaKnown RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 EPN1Q9Y6I3 576 aaPredicted RBP21.61■■□□□ 1.05
SPNS2-203ENST00000570979 FRMD3A2A2Y4 597 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 WDR46O15213 610 aaKnown RBP21.6■■□□□ 1.05
SPNS2-203ENST00000570979 GRK4P32298 578 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 GCLCP48506 637 aaPredicted RBP21.6■■□□□ 1.05
SPNS2-203ENST00000570979 PPP2R3AQ06190 1150 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 SPIRE1Q08AE8 756 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 EDRF1Q3B7T1 1238 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 HERC4Q5GLZ8 1057 aaPredicted RBP21.6■■□□□ 1.05
SPNS2-203ENST00000570979 NCAPH2Q6IBW4 605 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 POTEEQ6S8J3 1075 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 KCNK18Q7Z418 384 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 TMEM106CQ9BVX2 250 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 NDST4Q9H3R1 872 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 FAM184BQ9ULE4 1060 aa21.6■■□□□ 1.05
SPNS2-203ENST00000570979 TNPO2O14787 897 aaKnown RBP21.59■■□□□ 1.05
SPNS2-203ENST00000570979 GAP43P17677 238 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 CYP11B2P19099 503 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 FLT3LGP49771 235 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 SLC12A3P55017 1021 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 IRX3P78415 501 aaPredicted RBP21.59■■□□□ 1.05
SPNS2-203ENST00000570979 MEA1Q16626 185 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 CATSPER3Q86XQ3 398 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 PRPF38AQ8NAV1 312 aaKnown RBP21.59■■□□□ 1.05
SPNS2-203ENST00000570979 KIFC2Q96AC6 838 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 LENG9Q96B70 501 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 HAUS4Q9H6D7 363 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 TXNRD2Q9NNW7 524 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 POTEB3A0JP26 581 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 EFCAB8A8MWE9 144 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 E9PMD0 336 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 MSH4O15457 936 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 CFBP00751 764 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 SLC20A2Q08357 652 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 ECM1Q16610 540 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 POTEBQ6S5H4 581 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 KCND2Q9NZV8 630 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 COL4A3BPQ9Y5P4 624 aa21.59■■□□□ 1.05
SPNS2-203ENST00000570979 FAM86B1E9PN63 330 aa21.58■■□□□ 1.04
SPNS2-203ENST00000570979 MED24O75448 989 aa21.58■■□□□ 1.04
SPNS2-203ENST00000570979 NDUFA10O95299 355 aa21.58■■□□□ 1.04
SPNS2-203ENST00000570979 EYA4O95677 639 aa21.58■■□□□ 1.04
SPNS2-203ENST00000570979 FAM86B2P0C5J1 330 aa21.58■■□□□ 1.04
SPNS2-203ENST00000570979 MARSP56192 900 aaKnown RBP21.58■■□□□ 1.04
SPNS2-203ENST00000570979 HERVK_113P62684 666 aa21.58■■□□□ 1.04
SPNS2-203ENST00000570979 NEK9Q8TD19 979 aa21.58■■□□□ 1.04
SPNS2-203ENST00000570979 OPLAHO14841 1288 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 ICAM1P05362 532 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 USP14P54578 494 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 SNAP25P60880 206 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 PPP2R5CQ13362 524 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 MIIPQ5JXC2 388 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 NIPA1Q7RTP0 329 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 IPO4Q8TEX9 1081 aaKnown RBP21.57■■□□□ 1.04
SPNS2-203ENST00000570979 UBXN4Q92575 508 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 C12orf42Q96LP6 360 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 KIAA1683Q9H0B3 1180 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 MORF4L1Q9UBU8 362 aa21.57■■□□□ 1.04
SPNS2-203ENST00000570979 ELNP15502 786 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 HNRNPH3P31942 346 aaKnown RBP21.56■■□□□ 1.04
SPNS2-203ENST00000570979 ZCWPW2Q504Y3 356 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms