RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ABLIM3O94929 683 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 APBA3O96018 575 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 CYP2E1P05181 493 aaPredicted RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 MMEP08473 750 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 MTHFD1P11586 935 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 P4HA1P13674 534 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 STMN1P16949 149 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 CASTP20810 708 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 RXRBP28702 533 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 IGHMBP2P38935 993 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 AK2P54819 239 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 AKAP17AQ02040 695 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 CACNB2Q08289 660 aaPredicted RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 KCNH2Q12809 1159 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 COL9A2Q14055 689 aaPredicted RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 GBX1Q14549 363 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 NR6A1Q15406 480 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 CCNG2Q16589 344 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 DDR2Q16832 855 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 C21orf62-AS1Q17RA5 79 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 MTERF2Q49AM1 385 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 CCDC122Q5T0U0 273 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 KIAA0319Q5VV43 1072 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 ZNF772Q68DY9 489 aaPredicted RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 TRIM68Q6AZZ1 485 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 GALNT17Q6IS24 598 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 PRR5LQ6MZQ0 368 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 XRRA1Q6P2D8 792 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 FIP1L1Q6UN15 594 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 SPOCD1Q6ZMY3 1216 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 SYNE3Q6ZMZ3 975 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 KIAA1211Q6ZU35 1233 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 ERMP1Q7Z2K6 904 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 SRLQ86TD4 932 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 TXNRD3Q86VQ6 643 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 NLRP14Q86W24 1093 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 SULF1Q8IWU6 871 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 RTKN2Q8IZC4 609 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 CELF2-AS1Q8N7Q2 184 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 UBR7Q8N806 425 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 TRIML1Q8N9V2 468 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 PLPP7Q8NBV4 271 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 KIAA1524Q8TCG1 905 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 FNIP1Q8TF40 1166 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 RUFY2Q8WXA3 655 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 HDAC2Q92769 488 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 MAP4K1Q92918 833 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 OSBP2Q969R2 916 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 ANAPC16Q96DE5 110 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 CFAP36Q96G28 342 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 TMX3Q96JJ7 454 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 JAKMIP1Q96N16 626 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 MPHOSPH8Q99549 860 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 YIPF4Q9BSR8 244 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 GTPBP4Q9BZE4 634 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 DNAI2Q9GZS0 605 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 PUS7LQ9H0K6 701 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 LMAN2LQ9H0V9 348 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 TCF7L2Q9NQB0 619 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 QPCTLQ9NXS2 382 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 SLC5A4Q9NY91 659 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 TFCP2L1Q9NZI6 479 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 HMG20BQ9P0W2 317 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 MTRRQ9UBK8 725 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 MINPP1Q9UNW1 487 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 ZNF232Q9UNY5 417 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 JAG2Q9Y219 1238 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 N6AMT1Q9Y5N5 214 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 ADGRG1Q9Y653 693 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 TACC3Q9Y6A5 838 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 GREB1LQ9C091 1923 aaPredicted RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 MROH5Q6ZUA9 1318 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 PNPLA7Q6ZV29 1317 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 IRS2Q9Y4H2 1338 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 MYH7BA7E2Y1 1941 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 hCG_1642624A0A1W2PR95 340 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TCRBV5S4A2TA0A5A2 114 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ZBBXA8MT70 800 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 FAM155AB1AL88 458 aaPredicted RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 SMIM22K7EJ46 135 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 M0QX08 132 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 HIP1O00291 1037 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 POLRMTO00411 1230 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 PLOD2O00469 737 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 PMM2O15305 246 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TLR5O60602 858 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TADA3O75528 432 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 DKK1O94907 266 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 SLC4A1P02730 911 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 SERPINB2P05120 415 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 CYP21A2P08686 494 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 FBXO45P0C2W1 286 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 HSPD1P10809 573 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 FERP16591 822 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 BTF3P20290 206 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 MUTP22033 750 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 XPAP23025 273 aaPredicted RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 HOXA10P31260 410 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms