RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 WDR90Q96KV7 1748 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 USP42Q9H9J4 1324 aaKnown RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 ADAMTS7Q9UKP4 1686 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 KLRG2A4D1S0 409 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 NEURL1BA8MQ27 555 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 WDR64B1ANS9 1081 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MAFGO15525 162 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 ADAM11O75078 769 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 SBF1O95248 1867 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 CKMP06732 381 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MYL3P08590 195 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 ITIH2P19823 946 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MX2P20592 715 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 BDNFP23560 247 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 TM4SF1P30408 202 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 CRKLP46109 303 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MTHFSP49914 203 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MECP2P51608 486 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 KPNA1P52294 538 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 GPR85P60893 370 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 RBM10P98175 930 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 AMPD2Q01433 879 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 TJP1Q07157 1748 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 DDR1Q08345 913 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 TTLL4Q14679 1199 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 KRT72Q14CN4 511 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MAPRE1Q15691 268 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 NBPF9Q3BBW0 867 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 C1orf141Q5JVX7 400 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 WDR78Q5VTH9 848 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 CHST15Q7LFX5 561 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 PCGF5Q86SE9 256 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 WFDC8Q8IUA0 241 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MAP4K3Q8IVH8 894 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 ZC3H7AQ8IWR0 971 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 CPXCR1Q8N123 301 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 FAM43AQ8N2R8 423 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 FIBCD1Q8N539 461 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MFSD2AQ8NA29 543 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 CHST14Q8NCH0 376 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 GALNT11Q8NCW6 608 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 DNAJB8Q8NHS0 232 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 SLC35G2Q8TBE7 412 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 SLC5A5Q92911 643 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 LRGUKQ96M69 825 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 KREMEN1Q96MU8 473 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 HERPUD2Q9BSE4 406 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 CELF4Q9BZC1 486 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 ATP13A2Q9NQ11 1180 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 PLCB1Q9NQ66 1216 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 AAASQ9NRG9 546 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 KLHL11Q9NVR0 708 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 MKS1Q9NXB0 559 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 ZNF69Q9UC07 566 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 DDX20Q9UHI6 824 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 SAP30BPQ9UHR5 308 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 FBXO9Q9UK97 447 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 FAM50BQ9Y247 325 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 ZNF652Q9Y2D9 606 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 SF3B6Q9Y3B4 125 aaKnown RBP3.91□□□□□ -1.78
CNOT1-221ENST00000569924 NPFFR2Q9Y5X5 522 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 CLSPNQ9HAW4 1339 aa3.91□□□□□ -1.78
CNOT1-221ENST00000569924 TNRC6CQ9HCJ0 1690 aaKnown RBP3.9□□□□□ -1.78
CNOT1-221ENST00000569924 KCPQ6ZWJ8 1503 aa3.9□□□□□ -1.78
CNOT1-221ENST00000569924 NRXN2Q9P2S2 1712 aa3.9□□□□□ -1.78
CNOT1-221ENST00000569924 SCN11AQ9UI33 1791 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 KLHL33A6NCF5 533 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 TRIM75PA6NK02 468 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 POLRMTO00411 1230 aaKnown RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PMM2O15305 246 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 DDX3YO15523 660 aaKnown RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDHGA12O60330 932 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 LILRB5O75023 590 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 VAMP4O75379 141 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 DGAT1O75907 488 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 IL33O95760 270 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 NEFMP07197 916 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 AKAP5P24588 427 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 CD68P34810 354 aaPredicted RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 HALP42357 657 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 TNNT2P45379 298 aaPredicted RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 TRAPPC10P48553 1259 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 AK2P54819 239 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 ADCY1Q08828 1119 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 LMOD3Q0VAK6 560 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PAK1Q13153 545 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 TMEM177Q53S58 311 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 ANO1Q5XXA6 986 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 INTS5Q6P9B9 1019 aaKnown RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 B3GNT9Q6UX72 402 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 SV2AQ7L0J3 742 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 UBE3DQ7Z6J8 389 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 C16orf71Q8IYS4 520 aaPredicted RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 VWA5B2Q8N398 1253 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 ANKRD42Q8N9B4 389 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDH19Q8TAB3 1148 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.9□□□□□ -1.791e-24■■■■■ 53.2
CNOT1-221ENST00000569924 XAGE3Q8WTP9 111 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 ISL2Q96A47 359 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 TNIP3Q96KP6 325 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms