RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 RC3H2Q9HBD1 1191 aaKnown RBP15.57■□□□□ 0.08
CNOT1-215ENST00000569020 TMEM260Q9NX78 707 aa15.57■□□□□ 0.08
CNOT1-215ENST00000569020 NAP1L2Q9ULW6 460 aaPredicted RBP15.57■□□□□ 0.08
CNOT1-215ENST00000569020 PCDHA2Q9Y5H9 948 aa15.57■□□□□ 0.08
CNOT1-215ENST00000569020 SMIM35A0A1B0GVV1 85 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 MEIS1O00470 390 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 CDC45O75419 566 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 DGKIO75912 1065 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 ATG7O95352 703 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 IL9P15248 144 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 CDC27P30260 824 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 TMEM62Q0P6H9 643 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 ITGB3BPQ13352 177 aaPredicted RBP15.56■□□□□ 0.08
CNOT1-215ENST00000569020 TMEM31Q5JXX7 168 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 NIPA1Q7RTP0 329 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 GJD3Q8N144 294 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 NME8Q8N427 588 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 CELF4Q9BZC1 486 aaKnown RBP15.56■□□□□ 0.08
CNOT1-215ENST00000569020 AGO3Q9H9G7 860 aaKnown RBP15.56■□□□□ 0.08
CNOT1-215ENST00000569020 BRWD1Q9NSI6 2320 aa15.56■□□□□ 0.08
CNOT1-215ENST00000569020 WDR81Q562E7 1941 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 IGSF9BQ9UPX0 1349 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 CCDC196A0A1B0GTZ2 297 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 GRXCR2A6NFK2 248 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 H3BQ06 376 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-215ENST00000569020 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
CNOT1-215ENST00000569020 BACH1O14867 736 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 NCK2O43639 380 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 HBP1O60381 514 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 STAG3L1P0CL83 205 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 SSTR3P32745 418 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-215ENST00000569020 METAP2P50579 478 aaKnown RBP eCLIP15.55■□□□□ 0.08
CNOT1-215ENST00000569020 PAK2Q13177 524 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 FAM160B1Q5W0V3 765 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 MTHFD1LQ6UB35 978 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 SKAP1Q86WV1 359 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 PLA2G4DQ86XP0 818 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 TRAPPC12Q8WVT3 735 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 CLP1Q92989 425 aaKnown RBP15.55■□□□□ 0.08
CNOT1-215ENST00000569020 LRFN3Q9BTN0 628 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 PLVAPQ9BX97 442 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 FAM217BQ9NTX9 383 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-215ENST00000569020 CLDND1Q9NY35 253 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 PADI3Q9ULW8 664 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 FAM50BQ9Y247 325 aa15.55■□□□□ 0.08
CNOT1-215ENST00000569020 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 IGKV6D-21A0A0A0MT36 114 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 PI4K2BG5E9Z4 385 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 GRM6O15303 877 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 LINC00271P0C7V0 271 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 KLRC1P26715 233 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 KRT76Q01546 638 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 PFKFB3Q16875 520 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-215ENST00000569020 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 MCTP2Q6DN12 878 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 NPAS4Q8IUM7 802 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 CMTR2Q8IYT2 770 aaKnown RBP15.54■□□□□ 0.08
CNOT1-215ENST00000569020 CCDC12Q8WUD4 166 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-215ENST00000569020 LINC01599Q8WXQ3 324 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 KHSRPQ92945 711 aaKnown RBP eCLIP15.54■□□□□ 0.083e-10■□□□□ 10.7
CNOT1-215ENST00000569020 CD320Q9NPF0 282 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 ZNF302Q9NR11 478 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 HCN4Q9Y3Q4 1203 aa15.54■□□□□ 0.08
CNOT1-215ENST00000569020 COL1A2P08123 1366 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 FNDC1Q4ZHG4 1894 aaPredicted RBP15.53■□□□□ 0.08
CNOT1-215ENST00000569020 GPR37L1O60883 481 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 SCG2P13521 617 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 ADD1P35611 737 aaKnown RBP15.53■□□□□ 0.08
CNOT1-215ENST00000569020 COL19A1Q14993 1142 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 ODR4Q5SWX8 454 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 MIS18BP1Q6P0N0 1132 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 ABHD15Q6UXT9 468 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 FAM43BQ6ZT52 329 aaPredicted RBP15.53■□□□□ 0.08
CNOT1-215ENST00000569020 RTN4RL1Q86UN2 441 aaPredicted RBP15.53■□□□□ 0.08
CNOT1-215ENST00000569020 ATP8B4Q8TF62 1192 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 P2RX5Q93086 422 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 C6orf50Q9HD87 102 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 LRFN2Q9ULH4 789 aa15.53■□□□□ 0.08
CNOT1-215ENST00000569020 PLXNA4Q9HCM2 1894 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 ESYT2A0FGR8 921 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 FAM86B1E9PN63 330 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 CCNE2O96020 404 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 MMP1P03956 469 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 CYP3A4P08684 503 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 FAM86B2P0C5J1 330 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 GNA11P29992 359 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 PLA2G5P39877 138 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
CNOT1-215ENST00000569020 APOBRQ0VD83 1088 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 NFX1Q12986 1120 aaKnown RBP15.52■□□□□ 0.08
CNOT1-215ENST00000569020 NAALADL2Q58DX5 795 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 ZNF484Q5JVG2 852 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 PDXDC2PQ6P474 469 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 Q6ZUG5 572 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 CCDC60Q8IWA6 550 aaPredicted RBP15.52■□□□□ 0.08
CNOT1-215ENST00000569020 FAM122AQ96E09 287 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 ZNF577Q9BSK1 485 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 ZMYND12Q9H0C1 365 aa15.52■□□□□ 0.08
CNOT1-215ENST00000569020 ALG13Q9NP73 1137 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms