RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 QRICH1Q2TAL8 776 aa13.73□□□□□ -0.21
VPS9D1-207ENST00000568691 ADGRF4Q8IZF3 695 aa13.73□□□□□ -0.21
VPS9D1-207ENST00000568691 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
VPS9D1-207ENST00000568691 CHD8Q9HCK8 2581 aa13.73□□□□□ -0.21
VPS9D1-207ENST00000568691 PPP1R11O60927 126 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 CD52P31358 61 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 TECP42680 631 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 ARHGAP4P98171 946 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 PGM5Q15124 567 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 ANGPT1Q15389 498 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 STOX1Q6ZVD7 989 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 NPAS4Q8IUM7 802 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 CCDC105Q8IYK2 499 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 GPR20Q99678 358 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 SNX14Q9Y5W7 946 aa13.72□□□□□ -0.21
VPS9D1-207ENST00000568691 HIDE1A8MVS5 230 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 CFBP00751 764 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 PSMA5P28066 241 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 APOBRQ0VD83 1088 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 PUM1Q14671 1186 aaKnown RBP eCLIP13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 RASGRP4Q8TDF6 673 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 CDCA3Q99618 268 aaPredicted RBP13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 TMX1Q9H3N1 280 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 JMJD4Q9H9V9 463 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
VPS9D1-207ENST00000568691 SLC27A2O14975 620 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 WEE2P0C1S8 567 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 TGFB3P10600 412 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 AOC1P19801 751 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 GPATCH4Q5T3I0 446 aaKnown RBP13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 LLGL2Q6P1M3 1020 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 KCNV1Q6PIU1 500 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 DCLK2Q8N568 766 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 MICAL1Q8TDZ2 1067 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 CDY2AQ9Y6F7 541 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 R4GN57 208 aa13.7□□□□□ -0.22
VPS9D1-207ENST00000568691 MYH6P13533 1939 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 MBLAC1A4D2B0 266 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 FGF18O76093 207 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 LMNAP02545 664 aaKnown RBP13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 GNAT1P11488 350 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 UBE3AQ05086 875 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 ALX1Q15699 326 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 KANK3Q6NY19 840 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 CYFIP1Q7L576 1253 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 DTWD2Q8NBA8 298 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 FLCNQ8NFG4 579 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 DNAJB3Q8WWF6 145 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 TTC14Q96N46 770 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
VPS9D1-207ENST00000568691 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 MGEA5O60502 916 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 FGAP02671 866 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 NEK4P51957 841 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 UTP14CQ5TAP6 766 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 PLPP4Q5VZY2 271 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 TBC1D10CQ8IV04 446 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 ZKSCAN3Q9BRR0 538 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 CWH43Q9H720 699 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 TOMM22Q9NS69 142 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 NR2E1Q9Y466 385 aa13.68□□□□□ -0.22
VPS9D1-207ENST00000568691 DOCK5Q9H7D0 1870 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 NRCAMQ92823 1304 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 SPATA31C2B4DYI2 1134 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 CD2BP2O95400 341 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 SCG2P13521 617 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 FAM102BQ5T8I3 360 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 TAF2Q6P1X5 1199 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 ZDHHC14Q8IZN3 488 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 COLGALT1Q8NBJ5 622 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 ADAM7Q9H2U9 754 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 ERVK-5Q9HDB9 667 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 RALYQ9UKM9 306 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 CYP46A1Q9Y6A2 500 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 ATRXP46100 2492 aa13.67□□□□□ -0.22
VPS9D1-207ENST00000568691 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-207ENST00000568691 HAND2P61296 217 aa13.66□□□□□ -0.22
VPS9D1-207ENST00000568691 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-207ENST00000568691 RUFY3Q7L099 469 aa13.66□□□□□ -0.22
VPS9D1-207ENST00000568691 CYP2W1Q8TAV3 490 aa13.66□□□□□ -0.22
VPS9D1-207ENST00000568691 MTMR8Q96EF0 704 aa13.66□□□□□ -0.22
VPS9D1-207ENST00000568691 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms