RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 RUFY4Q6ZNE9 571 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 ZNF365Q70YC5 407 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 DEFB128Q7Z7B8 93 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 TDHQ8IZJ6 230 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 MTMR9Q96QG7 549 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.66□□□□□ -0.06
CNOT1-213ENST00000568158 IL23AQ9NPF7 189 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 VAV3Q9UKW4 847 aa14.66□□□□□ -0.06
CNOT1-213ENST00000568158 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 KLRC1P26715 233 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 THPOP40225 353 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 SLC26A2P50443 739 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 PPP2R5CQ13362 524 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 TTC38Q5R3I4 469 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 TRAF7Q6Q0C0 670 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 SLFN12Q8IYM2 578 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 CCDC155Q8N6L0 562 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 CAGE1Q8TC20 777 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 ATP8B4Q8TF62 1192 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 TNPO1Q92973 898 aaKnown RBP14.65□□□□□ -0.06
CNOT1-213ENST00000568158 INTS4Q96HW7 963 aaKnown RBP14.65□□□□□ -0.06
CNOT1-213ENST00000568158 PCDHA12Q9UN75 941 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 PCDHB6Q9Y5E3 794 aa14.65□□□□□ -0.06
CNOT1-213ENST00000568158 NEMFO60524 1076 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 STBD1O95210 358 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 FGBP02675 491 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 SELPP16109 830 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 RBL2Q08999 1139 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 SPIRE1Q08AE8 756 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 ZNF484Q5JVG2 852 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 NCAPH2Q6IBW4 605 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 LRRC8DQ7L1W4 858 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 HSCBQ8IWL3 235 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 RPUSD2Q8IZ73 545 aaKnown RBP14.64□□□□□ -0.07
CNOT1-213ENST00000568158 C4orf32Q8N8J7 132 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 BANK1Q8NDB2 785 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 RDM1Q8NG50 284 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 DNAJB3Q8WWF6 145 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 BBXQ8WY36 941 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-213ENST00000568158 OSBPL7Q9BZF2 842 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-213ENST00000568158 NRBP2Q9NSY0 501 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 NOL7Q9UMY1 257 aaKnown RBP14.64□□□□□ -0.07
CNOT1-213ENST00000568158 EVPLQ92817 2033 aa14.64□□□□□ -0.07
CNOT1-213ENST00000568158 TET1Q8NFU7 2136 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 MBLAC1A4D2B0 266 aaPredicted RBP14.63□□□□□ -0.07
CNOT1-213ENST00000568158 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 RSPH10B2B2RC85 870 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 ZBTB42B2RXF5 422 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 RSPH10BP0C881 870 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 EPHA7Q15375 998 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 MTHFD1LQ6UB35 978 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 SPRYD3Q8NCJ5 442 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 DYDC2Q96IM9 177 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 SH2D3AQ9BRG2 576 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 RGL1Q9NZL6 768 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 TUBE1Q9UJT0 475 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 IGSF9BQ9UPX0 1349 aa14.63□□□□□ -0.07
CNOT1-213ENST00000568158 A0A1W2PPC1 479 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 VPS37CA5D8V6 355 aaPredicted RBP14.62□□□□□ -0.07
CNOT1-213ENST00000568158 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 NBNO60934 754 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 OATP04181 439 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 CTSHP09668 335 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 SYT1P21579 422 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 TECP42680 631 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 TRAPPC10P48553 1259 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 PRKCEQ02156 737 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 PTGDRQ13258 359 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 CTTNQ14247 550 aaKnown RBP14.62□□□□□ -0.07
CNOT1-213ENST00000568158 MBTPS1Q14703 1052 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 OTOP2Q7RTS6 562 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 FTOQ9C0B1 505 aaKnown RBP eCLIP14.62□□□□□ -0.07
CNOT1-213ENST00000568158 FAM49AQ9H0Q0 323 aaPredicted RBP14.62□□□□□ -0.07
CNOT1-213ENST00000568158 WRAP73Q9P2S5 460 aaPredicted RBP14.62□□□□□ -0.07
CNOT1-213ENST00000568158 PCDHA2Q9Y5H9 948 aa14.62□□□□□ -0.07
CNOT1-213ENST00000568158 A0A087WWV3 80 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 SOX1O00570 391 aaPredicted RBP14.61□□□□□ -0.07
CNOT1-213ENST00000568158 ZBTB39O15060 712 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 SLITRK3O94933 977 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 CHRNA1P02708 482 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 P4HBP07237 508 aaKnown RBP14.61□□□□□ -0.07
CNOT1-213ENST00000568158 OR52Z1P0C646 297 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 RFC2P35250 354 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 QARSP47897 775 aaKnown RBP14.61□□□□□ -0.07
CNOT1-213ENST00000568158 PSMC5P62195 406 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 TCTN1Q2MV58 587 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 RNPC3Q96LT9 517 aaKnown RBP14.61□□□□□ -0.07
CNOT1-213ENST00000568158 EIF2AK1Q9BQI3 630 aaKnown RBP14.61□□□□□ -0.07
CNOT1-213ENST00000568158 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.61□□□□□ -0.07
CNOT1-213ENST00000568158 TRIOBPQ9H2D6 2365 aa14.61□□□□□ -0.07
CNOT1-213ENST00000568158 SMIM35A0A1B0GVV1 85 aa14.6□□□□□ -0.07
CNOT1-213ENST00000568158 POTEMA6NI47 508 aa14.6□□□□□ -0.07
CNOT1-213ENST00000568158 PDCP20941 246 aa14.6□□□□□ -0.07
CNOT1-213ENST00000568158 CYP4A11Q02928 519 aa14.6□□□□□ -0.07
CNOT1-213ENST00000568158 TMEM62Q0P6H9 643 aa14.6□□□□□ -0.07
CNOT1-213ENST00000568158 ORC2Q13416 577 aaPredicted RBP14.6□□□□□ -0.07
CNOT1-213ENST00000568158 TARBP2Q15633 366 aaKnown RBP14.6□□□□□ -0.07
CNOT1-213ENST00000568158 MTERF2Q49AM1 385 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms