RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 ZNF689Q96CS4 500 aaPredicted RBP21.45■■□□□ 1.02
GTF3C1-207ENST00000567806 CLDND1Q9NY35 253 aa21.45■■□□□ 1.02
GTF3C1-207ENST00000567806 COL4A6Q14031 1691 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 GRM6O15303 877 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 GPR37L1O60883 481 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 DGKIO75912 1065 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 HMGB1P09429 215 aaKnown RBP21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 SREBF1P36956 1147 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 SLC26A2P50443 739 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 ITGB3BPQ13352 177 aaPredicted RBP21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 CENPQQ7L2Z9 268 aaPredicted RBP21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 RASEFQ8IZ41 740 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 TRAPPC12Q8WVT3 735 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 CELF4Q9BZC1 486 aaKnown RBP21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 TMEM260Q9NX78 707 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 PADI3Q9ULW8 664 aa21.44■■□□□ 1.02
GTF3C1-207ENST00000567806 SMIM35A0A1B0GVV1 85 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 BACH1O14867 736 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 ATG7O95352 703 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 STAG3L1P0CL83 205 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 KRT76Q01546 638 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 PAK2Q13177 524 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 ADCK5Q3MIX3 580 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 FAM160B1Q5W0V3 765 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 MTHFD1LQ6UB35 978 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 NIPA1Q7RTP0 329 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 RTN4RL1Q86UN2 441 aaPredicted RBP21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 PLVAPQ9BX97 442 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 RC3H2Q9HBD1 1191 aaKnown RBP21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 HCN4Q9Y3Q4 1203 aa21.43■■□□□ 1.02
GTF3C1-207ENST00000567806 CCDC196A0A1B0GTZ2 297 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 DDX39AO00148 427 aaKnown RBP21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 HBP1O60381 514 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 KLRC1P26715 233 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 PLA2G5P39877 138 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 JAKMIP3Q5VZ66 844 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 PLA2G4DQ86XP0 818 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 NPAS4Q8IUM7 802 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 LRFN2Q9ULH4 789 aa21.42■■□□□ 1.02
GTF3C1-207ENST00000567806 IGSF9BQ9UPX0 1349 aa21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 LINC00271P0C7V0 271 aa21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 CDC27P30260 824 aa21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 CLK2P49760 499 aaKnown RBP21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 RCAN1P53805 252 aa21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 COL19A1Q14993 1142 aa21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 SKAP1Q86WV1 359 aa21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 CMTR2Q8IYT2 770 aaKnown RBP21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 LINC01599Q8WXQ3 324 aa21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 FAM217BQ9NTX9 383 aaPredicted RBP21.41■■□□□ 1.02
GTF3C1-207ENST00000567806 KDM3AQ9Y4C1 1321 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 IGKV6D-21A0A0A0MT36 114 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 FAM86C2PA6NEL3 165 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 CDC45O75419 566 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 SCG2P13521 617 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 ALADP13716 330 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 ADD1P35611 737 aaKnown RBP21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 NFX1Q12986 1120 aaKnown RBP21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 PFKFB3Q16875 520 aaPredicted RBP21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 NAALADL2Q58DX5 795 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 MCTP2Q6DN12 878 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 MIS18BP1Q6P0N0 1132 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 PDXDC2PQ6P474 469 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 ABHD15Q6UXT9 468 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 FAM43BQ6ZT52 329 aaPredicted RBP21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 IGFLR1Q9H665 355 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 ALG13Q9NP73 1137 aaKnown RBP21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 ZNF302Q9NR11 478 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 PLAGL2Q9UPG8 496 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 GINS2Q9Y248 185 aa21.4■■□□□ 1.02
GTF3C1-207ENST00000567806 CSPG5O95196 566 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 CCNE2O96020 404 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 METAP2P50579 478 aaKnown RBP eCLIP21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 HYAL1Q12794 435 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 ZNF484Q5JVG2 852 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 ODR4Q5SWX8 454 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 SWSAP1Q6NVH7 229 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 ATP8B4Q8TF62 1192 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 P2RX5Q93086 422 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 PPP2R3CQ969Q6 453 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 C6orf50Q9HD87 102 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 RNF216Q9NWF9 866 aaPredicted RBP21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 PRKAG3Q9UGI9 489 aa21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 ARIH1Q9Y4X5 557 aaPredicted RBP21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 MRPL42Q9Y6G3 142 aaKnown RBP21.39■■□□□ 1.01
GTF3C1-207ENST00000567806 TTC3P53804 2025 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 FAM86B1E9PN63 330 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 IPO5O00410 1097 aaKnown RBP21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 MMP1P03956 469 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 CYP3A4P08684 503 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 FAM86B2P0C5J1 330 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 IBSPP21815 317 aaPredicted RBP21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 TMEM266Q2M3C6 531 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 CTC1Q2NKJ3 1217 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 PAN2Q504Q3 1202 aaKnown RBP21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 CKAP2LQ8IYA6 745 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 CRIPAKQ8N1N5 446 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 CCDC12Q8WUD4 166 aaPredicted RBP21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 ZNF577Q9BSK1 485 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 C11orf16Q9NQ32 467 aa21.38■■□□□ 1.01
GTF3C1-207ENST00000567806 TBC1D22BQ9NU19 505 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms