RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ADGRE1Q14246 886 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 IER5Q5VY09 327 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 FAM117BQ6P1L5 589 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 PDXDC2PQ6P474 469 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.84□□□□□ -1.155e-7■□□□□ 10.2
SF3B3-209ENST00000567635 TMCO2Q7Z6W1 182 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-209ENST00000567635 NME8Q8N427 588 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 PPM1EQ8WY54 764 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 APBB2Q92870 758 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 IL17RAQ96F46 866 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 IFIH1Q9BYX4 1025 aaKnown RBP7.84□□□□□ -1.15
SF3B3-209ENST00000567635 OSBPL7Q9BZF2 842 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 CERS4Q9HA82 394 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 ZNF302Q9NR11 478 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 TCEAL9Q9UHQ7 104 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 PCDHA4Q9UN74 947 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 INSL6Q9Y581 213 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 PCDHA10Q9Y5I2 948 aa7.84□□□□□ -1.15
SF3B3-209ENST00000567635 TRANK1O15050 2925 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 TTC28Q96AY4 2481 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 CYP3A7-CYP3A51PA0A087WV96 503 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 SMIM35A0A1B0GVV1 85 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 RBAK-RBAKDNI3L0D1 243 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 M0QZ92 97 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 M0R2N6 131 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 RFXAPO00287 272 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 MSH4O15457 936 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 EDIL3O43854 480 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 PRR29P0C7W0 189 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 XBP1P17861 261 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 POU3F3P20264 500 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-209ENST00000567635 ATP4AP20648 1035 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 CYP3A7P24462 503 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 NEK4P51957 841 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 AK2P54819 239 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 MRPS6P82932 125 aaKnown RBP7.83□□□□□ -1.16
SF3B3-209ENST00000567635 MGAT3Q09327 533 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 LPIN1Q14693 890 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 CCDC85BQ15834 202 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-209ENST00000567635 ZNF484Q5JVG2 852 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 MTHFD1LQ6UB35 978 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 CCDC60Q8IWA6 550 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-209ENST00000567635 CKAP2LQ8IYA6 745 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 SMAP1Q8IYB5 467 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-209ENST00000567635 USP38Q8NB14 1042 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 DAGLBQ8NCG7 672 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 TBCKQ8TEA7 893 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 ATP8B4Q8TF62 1192 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 TRAPPC12Q8WVT3 735 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 ARNTL2Q8WYA1 636 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 WASF1Q92558 559 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 TOP1MTQ969P6 601 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 LENG9Q96B70 501 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 ZBTB10Q96DT7 871 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 AIFM3Q96NN9 605 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 RIT2Q99578 217 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 FAM49AQ9H0Q0 323 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-209ENST00000567635 SAMM50Q9Y512 469 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 MAFBQ9Y5Q3 323 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-209ENST00000567635 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 COL1A2P08123 1366 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 CHD7Q9P2D1 2997 aa7.83□□□□□ -1.16
SF3B3-209ENST00000567635 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 LCHNA4D1U4 455 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 LINC01553A4QN01 128 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 EPOPA6NHQ4 379 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 WDR64B1ANS9 1081 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 ENPP3O14638 875 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 GTPBP6O43824 516 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 GAS7O60861 476 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 ARHGEF15O94989 841 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 UPP2O95045 317 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 CTDNEP1O95476 244 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 SEC24BO95487 1268 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 GHRP10912 638 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 ERVK-21P61565 698 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 HTRA4P83105 476 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 NONOQ15233 471 aaKnown RBP eCLIP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 NPY5RQ15761 445 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 RALGAPA2Q2PPJ7 1873 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 Q4G0T1 1027 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 FBXO47Q5MNV8 452 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 TSHZ1Q6ZSZ6 1077 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 KRT25Q7Z3Z0 450 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 MYOCDQ8IZQ8 938 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 BBXQ8WY36 941 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 SLC5A5Q92911 643 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 TGS1Q96RS0 853 aaKnown RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 PHF20Q9BVI0 1012 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 CELF4Q9BZC1 486 aaKnown RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 TSPYL2Q9H2G4 693 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 DISC1Q9NRI5 854 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 NRBP2Q9NSY0 501 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 ORC3Q9UBD5 711 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-209ENST00000567635 GABBR1Q9UBS5 961 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 KCNJ14Q9UNX9 436 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 SQORQ9Y6N5 450 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 PRUNE2Q8WUY3 3088 aa7.82□□□□□ -1.16
SF3B3-209ENST00000567635 STK36Q9NRP7 1315 aa7.81□□□□□ -1.16
SF3B3-209ENST00000567635 CCDC194A0A1B0GVG4 234 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms