RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 HSPA4P34932 840 aa31.48■■■□□ 2.63
UBFD1-206ENST00000566669 AKAP17AQ02040 695 aaKnown RBP31.48■■■□□ 2.63
UBFD1-206ENST00000566669 ODR4Q5SWX8 454 aa31.48■■■□□ 2.63
UBFD1-206ENST00000566669 BANK1Q8NDB2 785 aa31.48■■■□□ 2.63
UBFD1-206ENST00000566669 CLP1Q92989 425 aaKnown RBP31.48■■■□□ 2.63
UBFD1-206ENST00000566669 PGBD1Q96JS3 809 aa31.48■■■□□ 2.63
UBFD1-206ENST00000566669 FAM49AQ9H0Q0 323 aaPredicted RBP31.48■■■□□ 2.63
UBFD1-206ENST00000566669 TBC1D22BQ9NU19 505 aa31.48■■■□□ 2.63
UBFD1-206ENST00000566669 BACH1O14867 736 aa31.47■■■□□ 2.63
UBFD1-206ENST00000566669 ADD1P35611 737 aaKnown RBP31.47■■■□□ 2.63
UBFD1-206ENST00000566669 MIS18BP1Q6P0N0 1132 aa31.47■■■□□ 2.63
UBFD1-206ENST00000566669 Q6ZUG5 572 aa31.47■■■□□ 2.63
UBFD1-206ENST00000566669 PLA2G4DQ86XP0 818 aa31.47■■■□□ 2.63
UBFD1-206ENST00000566669 REXO1Q8N1G1 1221 aaKnown RBP31.47■■■□□ 2.63
UBFD1-206ENST00000566669 JAKMIP1Q96N16 626 aaKnown RBP31.47■■■□□ 2.63
UBFD1-206ENST00000566669 PLVAPQ9BX97 442 aa31.47■■■□□ 2.63
UBFD1-206ENST00000566669 CELF4Q9BZC1 486 aaKnown RBP31.47■■■□□ 2.63
UBFD1-206ENST00000566669 NSUN3Q9H649 340 aaKnown RBP31.47■■■□□ 2.63
UBFD1-206ENST00000566669 IGSF9BQ9UPX0 1349 aa31.47■■■□□ 2.63
UBFD1-206ENST00000566669 IPO5O00410 1097 aaKnown RBP31.46■■■□□ 2.63
UBFD1-206ENST00000566669 PRPF3O43395 683 aaKnown RBP31.46■■■□□ 2.63
UBFD1-206ENST00000566669 EPB41L2O43491 1005 aaKnown RBP31.46■■■□□ 2.63
UBFD1-206ENST00000566669 STAG3L1P0CL83 205 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 CTNNB1P35222 781 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 BMPR1AP36894 532 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 ABHD15Q6UXT9 468 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 ATP8B4Q8TF62 1192 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 BRF1Q92994 677 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 RC3H2Q9HBD1 1191 aaKnown RBP31.46■■■□□ 2.63
UBFD1-206ENST00000566669 TMEM260Q9NX78 707 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 FAM50BQ9Y247 325 aa31.46■■■□□ 2.63
UBFD1-206ENST00000566669 TCF20Q9UGU0 1960 aaKnown RBP31.46■■■□□ 2.63
UBFD1-206ENST00000566669 COL9A1P20849 921 aa31.45■■■□□ 2.63
UBFD1-206ENST00000566669 PAK2Q13177 524 aa31.45■■■□□ 2.63
UBFD1-206ENST00000566669 BTG3Q14201 252 aaPredicted RBP31.45■■■□□ 2.63
UBFD1-206ENST00000566669 ZNF484Q5JVG2 852 aa31.45■■■□□ 2.63
UBFD1-206ENST00000566669 MTHFD1LQ6UB35 978 aa31.45■■■□□ 2.63
UBFD1-206ENST00000566669 CCDC148Q8NFR7 591 aa31.45■■■□□ 2.63
UBFD1-206ENST00000566669 CRYGNQ8WXF5 182 aa31.45■■■□□ 2.63
UBFD1-206ENST00000566669 ZNF689Q96CS4 500 aaPredicted RBP31.45■■■□□ 2.63
UBFD1-206ENST00000566669 BRWD1Q9NSI6 2320 aa31.45■■■□□ 2.63
UBFD1-206ENST00000566669 RALGAPA2Q2PPJ7 1873 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 KCNA5P22460 613 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 CD52P31358 61 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 KRT76Q01546 638 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 APOBRQ0VD83 1088 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 NAALADL2Q58DX5 795 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 JAKMIP3Q5VZ66 844 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 ZNF746Q6NUN9 644 aaPredicted RBP31.44■■■□□ 2.62
UBFD1-206ENST00000566669 NPAS4Q8IUM7 802 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 SMAP1Q8IYB5 467 aaPredicted RBP31.44■■■□□ 2.62
UBFD1-206ENST00000566669 AGXT2Q9BYV1 514 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 ZNF302Q9NR11 478 aa31.44■■■□□ 2.62
UBFD1-206ENST00000566669 FAM86B1E9PN63 330 aa31.43■■■□□ 2.62
UBFD1-206ENST00000566669 DGKIO75912 1065 aa31.43■■■□□ 2.62
UBFD1-206ENST00000566669 FAM86B2P0C5J1 330 aa31.43■■■□□ 2.62
UBFD1-206ENST00000566669 SKAP1Q86WV1 359 aa31.43■■■□□ 2.62
UBFD1-206ENST00000566669 CMTR2Q8IYT2 770 aaKnown RBP31.43■■■□□ 2.62
UBFD1-206ENST00000566669 PABPC5Q96DU9 382 aaKnown RBP31.43■■■□□ 2.62
UBFD1-206ENST00000566669 ZNF577Q9BSK1 485 aa31.43■■■□□ 2.62
UBFD1-206ENST00000566669 RNF26Q9BY78 433 aaPredicted RBP31.43■■■□□ 2.62
UBFD1-206ENST00000566669 AGO3Q9H9G7 860 aaKnown RBP31.43■■■□□ 2.62
UBFD1-206ENST00000566669 SNX14Q9Y5W7 946 aa31.43■■■□□ 2.62
UBFD1-206ENST00000566669 IGLV3-22A0A075B6J6 115 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 CCNE2O96020 404 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 RPS6KB1P23443 525 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 COL19A1Q14993 1142 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 PDXDC2PQ6P474 469 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 ZNF710Q8N1W2 664 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 PADI3Q9ULW8 664 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 CEP131Q9UPN4 1083 aa31.42■■■□□ 2.62
UBFD1-206ENST00000566669 TTC3P53804 2025 aa31.41■■■□□ 2.62
UBFD1-206ENST00000566669 DHX15O43143 795 aaKnown RBP31.41■■■□□ 2.62
UBFD1-206ENST00000566669 KLRC1P26715 233 aa31.41■■■□□ 2.62
UBFD1-206ENST00000566669 NEK9Q8TD19 979 aa31.41■■■□□ 2.62
UBFD1-206ENST00000566669 BBXQ8WY36 941 aaPredicted RBP31.41■■■□□ 2.62
UBFD1-206ENST00000566669 P2RX5Q93086 422 aa31.41■■■□□ 2.62
UBFD1-206ENST00000566669 CCDC136Q96JN2 1154 aa31.41■■■□□ 2.62
UBFD1-206ENST00000566669 CIITAP33076 1130 aa31.4■■■□□ 2.62
UBFD1-206ENST00000566669 PPP2R3CQ969Q6 453 aa31.4■■■□□ 2.62
UBFD1-206ENST00000566669 PSAPP07602 524 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 EVCP57679 992 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 PKN1Q16512 942 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 TCEAL5Q5H9L2 206 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 CCDC60Q8IWA6 550 aaPredicted RBP31.39■■■□□ 2.62
UBFD1-206ENST00000566669 CRIPAKQ8N1N5 446 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 TRAPPC12Q8WVT3 735 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 SH3GLB2Q9NR46 395 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 PCDHA10Q9Y5I2 948 aa31.39■■■□□ 2.62
UBFD1-206ENST00000566669 MAFBQ9Y5Q3 323 aaPredicted RBP31.39■■■□□ 2.62
UBFD1-206ENST00000566669 DDX39AO00148 427 aaKnown RBP31.38■■■□□ 2.61
UBFD1-206ENST00000566669 LINC00271P0C7V0 271 aa31.38■■■□□ 2.61
UBFD1-206ENST00000566669 IFNAR1P17181 557 aa31.38■■■□□ 2.61
UBFD1-206ENST00000566669 PTCRAQ6ISU1 281 aaPredicted RBP31.38■■■□□ 2.61
UBFD1-206ENST00000566669 SWSAP1Q6NVH7 229 aa31.38■■■□□ 2.61
UBFD1-206ENST00000566669 FAM177A1Q8N128 213 aaPredicted RBP31.38■■■□□ 2.61
UBFD1-206ENST00000566669 GADD45GIP1Q8TAE8 222 aaPredicted RBP31.38■■■□□ 2.61
UBFD1-206ENST00000566669 FAM167AQ96KS9 214 aa31.38■■■□□ 2.61
UBFD1-206ENST00000566669 C22orf23Q9BZE7 217 aa31.38■■■□□ 2.61
UBFD1-206ENST00000566669 GRXCR2A6NFK2 248 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms