RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TSHZ1Q6ZSZ6 1077 aa20.84■□□□□ 0.93
USB1-213ENST00000566292 CCDC60Q8IWA6 550 aaPredicted RBP20.84■□□□□ 0.93
USB1-213ENST00000566292 RASGRP4Q8TDF6 673 aa20.84■□□□□ 0.93
USB1-213ENST00000566292 CCDC12Q8WUD4 166 aaPredicted RBP20.84■□□□□ 0.93
USB1-213ENST00000566292 RNF26Q9BY78 433 aaPredicted RBP20.84■□□□□ 0.93
USB1-213ENST00000566292 AGO3Q9H9G7 860 aaKnown RBP20.84■□□□□ 0.93
USB1-213ENST00000566292 COG5Q9UP83 839 aa20.84■□□□□ 0.93
USB1-213ENST00000566292 PCDHA2Q9Y5H9 948 aa20.84■□□□□ 0.93
USB1-213ENST00000566292 IPO5O00410 1097 aaKnown RBP20.83■□□□□ 0.93
USB1-213ENST00000566292 RPLP2P05387 115 aaKnown RBP20.83■□□□□ 0.93
USB1-213ENST00000566292 GNA11P29992 359 aa20.83■□□□□ 0.93
USB1-213ENST00000566292 TOB2Q14106 344 aaPredicted RBP20.83■□□□□ 0.93
USB1-213ENST00000566292 AAK1Q2M2I8 961 aa20.83■□□□□ 0.93
USB1-213ENST00000566292 RUFY3Q7L099 469 aa20.83■□□□□ 0.93
USB1-213ENST00000566292 IL27Q8NEV9 243 aa20.83■□□□□ 0.93
USB1-213ENST00000566292 TNPO1Q92973 898 aaKnown RBP20.83■□□□□ 0.93
USB1-213ENST00000566292 NECAB3Q96P71 396 aaPredicted RBP20.83■□□□□ 0.93
USB1-213ENST00000566292 SLC26A6Q9BXS9 759 aa20.83■□□□□ 0.93
USB1-213ENST00000566292 ZSWIM6Q9HCJ5 1215 aa20.83■□□□□ 0.93
USB1-213ENST00000566292 ENPP3O14638 875 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 EPB41L2O43491 1005 aaKnown RBP20.82■□□□□ 0.92
USB1-213ENST00000566292 CD52P31358 61 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 SLC26A2P50443 739 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
USB1-213ENST00000566292 TMEM62Q0P6H9 643 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 MCTP2Q6DN12 878 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 MTHFD1LQ6UB35 978 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 LINC01599Q8WXQ3 324 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 HLA-CQ95604 372 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 SAMD11Q96NU1 681 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 VPS54Q9P1Q0 977 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 TRPV2Q9Y5S1 764 aa20.82■□□□□ 0.92
USB1-213ENST00000566292 KIAA1671Q9BY89 1806 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 SMIM35A0A1B0GVV1 85 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 BACH1O14867 736 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 EDIL3O43854 480 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 ATP4AP20648 1035 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 SETQ01105 290 aaPredicted RBP20.81■□□□□ 0.92
USB1-213ENST00000566292 IER5Q5VY09 327 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 FAM160B1Q5W0V3 765 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 TMEM192Q8IY95 271 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 ATP8B4Q8TF62 1192 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 ZNF577Q9BSK1 485 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 RC3H2Q9HBD1 1191 aaKnown RBP20.81■□□□□ 0.92
USB1-213ENST00000566292 ZNF302Q9NR11 478 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 SQORQ9Y6N5 450 aa20.81■□□□□ 0.92
USB1-213ENST00000566292 MYO7AQ13402 2215 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 HBP1O60381 514 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 CIITAP33076 1130 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 SWSAP1Q6NVH7 229 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 MIS18BP1Q6P0N0 1132 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 PDXDC2PQ6P474 469 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 RTN4RL1Q86UN2 441 aaPredicted RBP20.8■□□□□ 0.92
USB1-213ENST00000566292 CCDC148Q8NFR7 591 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 BICD2Q8TD16 824 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 LENG9Q96B70 501 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 IL17RAQ96F46 866 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 TBC1D22BQ9NU19 505 aa20.8■□□□□ 0.92
USB1-213ENST00000566292 IGSF9BQ9UPX0 1349 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 ZBTB42B2RXF5 422 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 H3BNC9 293 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 LINC00271P0C7V0 271 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 KLRC1P26715 233 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 PRR16Q569H4 304 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 ZNF746Q6NUN9 644 aaPredicted RBP20.79■□□□□ 0.92
USB1-213ENST00000566292 FIBCD1Q8N539 461 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 MRPL38Q96DV4 380 aaKnown RBP20.79■□□□□ 0.92
USB1-213ENST00000566292 LARP6Q9BRS8 491 aaKnown RBP20.79■□□□□ 0.92
USB1-213ENST00000566292 CELF4Q9BZC1 486 aaKnown RBP20.79■□□□□ 0.92
USB1-213ENST00000566292 CYP46A1Q9Y6A2 500 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 COL1A2P08123 1366 aa20.79■□□□□ 0.92
USB1-213ENST00000566292 KDM3AQ9Y4C1 1321 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 M0QZ92 97 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 GPM6BQ13491 265 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 NME8Q8N427 588 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 ZNF689Q96CS4 500 aaPredicted RBP20.78■□□□□ 0.92
USB1-213ENST00000566292 UPF3BQ9BZI7 483 aaKnown RBP20.78■□□□□ 0.92
USB1-213ENST00000566292 TM6SF1Q9BZW5 370 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 SH3GLB2Q9NR46 395 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 PADI3Q9ULW8 664 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 MAFBQ9Y5Q3 323 aaPredicted RBP20.78■□□□□ 0.92
USB1-213ENST00000566292 ADGRA3Q8IWK6 1321 aa20.78■□□□□ 0.92
USB1-213ENST00000566292 KRT76Q01546 638 aa20.77■□□□□ 0.92
USB1-213ENST00000566292 ZNF484Q5JVG2 852 aa20.77■□□□□ 0.92
USB1-213ENST00000566292 KIAA0319LQ8IZA0 1049 aa20.77■□□□□ 0.92
USB1-213ENST00000566292 CRIPAKQ8N1N5 446 aa20.77■□□□□ 0.92
USB1-213ENST00000566292 ZNF274Q96GC6 653 aaPredicted RBP20.77■□□□□ 0.92
USB1-213ENST00000566292 FTHL17Q9BXU8 183 aa20.77■□□□□ 0.92
USB1-213ENST00000566292 CDHR5Q9HBB8 845 aa20.77■□□□□ 0.92
USB1-213ENST00000566292 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.76■□□□□ 0.91
USB1-213ENST00000566292 DGKIO75912 1065 aa20.76■□□□□ 0.91
USB1-213ENST00000566292 SSRP1Q08945 709 aaKnown RBP20.76■□□□□ 0.91
USB1-213ENST00000566292 PAK2Q13177 524 aa20.76■□□□□ 0.91
USB1-213ENST00000566292 PTPROQ16827 1216 aa20.76■□□□□ 0.91
USB1-213ENST00000566292 TMEM266Q2M3C6 531 aa20.76■□□□□ 0.91
USB1-213ENST00000566292 SMAP1Q8IYB5 467 aaPredicted RBP20.76■□□□□ 0.91
USB1-213ENST00000566292 TMX1Q9H3N1 280 aa20.76■□□□□ 0.91
USB1-213ENST00000566292 UBE2ZQ9H832 354 aaPredicted RBP20.76■□□□□ 0.91
USB1-213ENST00000566292 MSH4O15457 936 aa20.75■□□□□ 0.91
USB1-213ENST00000566292 C22orf31O95567 290 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms