RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 TTLL7Q6ZT98 887 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 NME9Q86XW9 330 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 DCP2Q8IU60 420 aaKnown RBP6.54□□□□□ -1.36
CNOT1-209ENST00000566240 TRIM48Q8IWZ4 208 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 CLEC4DQ8WXI8 215 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 CLIP3Q96DZ5 547 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 CCDC120Q96HB5 630 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 NUP88Q99567 741 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-209ENST00000566240 PDGFDQ9GZP0 370 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-209ENST00000566240 AP5M1Q9H0R1 490 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 MYH16Q9H6N6 1097 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 CCM2LQ9NUG4 571 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-209ENST00000566240 USP36Q9P275 1121 aaKnown RBP6.54□□□□□ -1.36
CNOT1-209ENST00000566240 ZBTB21Q9ULJ3 1066 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 PCDHB4Q9Y5E5 795 aa6.54□□□□□ -1.36
CNOT1-209ENST00000566240 LOC102724159A0A0B4J2E5 919 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 FOXP2O15409 715 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 SGSM2O43147 1006 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 PSPNO60542 156 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 TMEM253P0C7T8 217 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 HDAC1Q13547 482 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-209ENST00000566240 PWP2Q15269 919 aaKnown RBP6.53□□□□□ -1.36
CNOT1-209ENST00000566240 NR0B2Q15466 257 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 FSCN1Q16658 493 aaKnown RBP6.53□□□□□ -1.36
CNOT1-209ENST00000566240 PPP4R4Q6NUP7 873 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 ZNF574Q6ZN55 896 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-209ENST00000566240 EPM2AIP1Q7L775 607 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-209ENST00000566240 WFDC3Q8IUB2 231 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 NETO2Q8NC67 525 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 TEKT5Q96M29 485 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 RPS6KC1Q96S38 1066 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 PRDM11Q9NQV5 511 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 PRDM7Q9NQW5 492 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 DNAJC28Q9NX36 388 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 PALD1Q9ULE6 856 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 SIT1Q9Y3P8 196 aa6.53□□□□□ -1.36
CNOT1-209ENST00000566240 PRAMEF25A6NGN4 478 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 RASSF10A6NK89 507 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 EFEMP2O95967 443 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 LPOP22079 712 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-209ENST00000566240 ENPP1P22413 925 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 MOGSQ13724 837 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 MILR1Q7Z6M3 343 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-209ENST00000566240 MORC4Q8TE76 937 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 JADE3Q92613 823 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 LRGUKQ96M69 825 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 AIFM3Q96NN9 605 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 ANO3Q9BYT9 981 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 RC3H2Q9HBD1 1191 aaKnown RBP6.52□□□□□ -1.37
CNOT1-209ENST00000566240 GOLGA2P5Q9HBQ8 144 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 RCAN3Q9UKA8 241 aa6.52□□□□□ -1.37
CNOT1-209ENST00000566240 TCRBV5S2A0A599 114 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 ACOT7O00154 380 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 COBLO75128 1261 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 ZRANB2O95218 330 aaKnown RBP eCLIP6.51□□□□□ -1.37
CNOT1-209ENST00000566240 PRNPP04156 253 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 GRIN1Q05586 938 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 CT83Q5H943 113 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 SYCP2LQ5T4T6 812 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 GORABQ5T7V8 394 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 SLC23A3Q6PIS1 610 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 ESPNLQ6ZVH7 1005 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 NLRX1Q86UT6 975 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 PHYKPLQ8IUZ5 450 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 SEMA4AQ9H3S1 761 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 C19orf44Q9H6X5 657 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 RXFP1Q9HBX9 757 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 ANLNQ9NQW6 1124 aa6.51□□□□□ -1.37
CNOT1-209ENST00000566240 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-209ENST00000566240 BTBD11A6QL63 1104 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 ERC2O15083 957 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 HPXP02790 462 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 MMEP08473 750 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 PNLIPP16233 465 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 ARL4AP40617 200 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 MANFP55145 182 aaKnown RBP6.5□□□□□ -1.37
CNOT1-209ENST00000566240 ERVFC1P60507 584 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 HERVK_113P62684 666 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 SRSF2Q01130 221 aaKnown RBP6.5□□□□□ -1.37
CNOT1-209ENST00000566240 UGT8Q16880 541 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 ARHGAP29Q52LW3 1261 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 TIGD5Q53EQ6 642 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 RRP12Q5JTH9 1297 aaKnown RBP6.5□□□□□ -1.37
CNOT1-209ENST00000566240 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 EXOC8Q8IYI6 725 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 C7orf31Q8N865 590 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 ARRDC4Q8NCT1 418 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 ASB15Q8WXK1 588 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 SSH1Q8WYL5 1049 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 ERCC4Q92889 916 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-209ENST00000566240 TIFAQ96CG3 184 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 EAF2Q96CJ1 260 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-209ENST00000566240 GBP4Q96PP9 640 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 CHST12Q9NRB3 414 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 NUDT5Q9UKK9 219 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 GPR45Q9Y5Y3 372 aa6.5□□□□□ -1.37
CNOT1-209ENST00000566240 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms