RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ZRSR1Q15695 479 aaKnown RBP16.56■□□□□ 0.24
SPG7-213ENST00000566221 TPRNQ4KMQ1 711 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 TMEM119Q4V9L6 283 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 POTEGQ6S5H5 508 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 C4orf19Q8IY42 314 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 FAM167AQ96KS9 214 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 TSEN34Q9BSV6 310 aaKnown RBP16.56■□□□□ 0.24
SPG7-213ENST00000566221 LMBRD1Q9NUN5 540 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 ERAP1Q9NZ08 941 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 EVPLQ92817 2033 aa16.56■□□□□ 0.24
SPG7-213ENST00000566221 MOXD2PA6NHM9 499 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 GADD45BO75293 160 aaPredicted RBP16.55■□□□□ 0.24
SPG7-213ENST00000566221 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
SPG7-213ENST00000566221 CAPN2P17655 700 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 PLCG1P19174 1290 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 SKOR2Q2VWA4 1001 aaPredicted RBP16.55■□□□□ 0.24
SPG7-213ENST00000566221 CCSAPQ6IQ19 270 aaPredicted RBP16.55■□□□□ 0.24
SPG7-213ENST00000566221 CKAP2LQ8IYA6 745 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 U2AF1L4Q8WU68 220 aaKnown RBP16.55■□□□□ 0.24
SPG7-213ENST00000566221 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 C16orf70Q9BSU1 422 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 KATNAL1Q9BW62 490 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 CRISPLD2Q9H0B8 497 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 GOLPH3LQ9H4A5 285 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 DDX19AQ9NUU7 478 aaKnown RBP16.55■□□□□ 0.24
SPG7-213ENST00000566221 WRAP73Q9P2S5 460 aaPredicted RBP16.55■□□□□ 0.24
SPG7-213ENST00000566221 STK17AQ9UEE5 414 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 KCNH3Q9ULD8 1083 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 HPSEQ9Y251 543 aa16.55■□□□□ 0.24
SPG7-213ENST00000566221 A0A1B0GVL5 298 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 H3BRB1 525 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 DNM1LO00429 736 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 ZNF862O60290 1169 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 CABYRO75952 493 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 SGPL1O95470 568 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 OATP04181 439 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 KCNA10Q16322 511 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 ECM1Q16610 540 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 XKR3Q5GH77 459 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 NACC1Q96RE7 527 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 MTG1Q9BT17 334 aaPredicted RBP16.54■□□□□ 0.24
SPG7-213ENST00000566221 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
SPG7-213ENST00000566221 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 BRCA2P51587 3418 aa16.54■□□□□ 0.24
SPG7-213ENST00000566221 A0A087X0B3 334 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 ASGR1P07306 291 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 MARK3P27448 753 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 STAT6P42226 847 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 SYKP43405 635 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 GJA8P48165 433 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 NDUFA8P51970 172 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 FAM160A1Q05DH4 1040 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 RRAGBQ5VZM2 374 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 PDILTQ8N807 584 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 ATP8B4Q8TF62 1192 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
SPG7-213ENST00000566221 KAT2BQ92831 832 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 CCDC43Q96MW1 224 aaKnown RBP16.53■□□□□ 0.24
SPG7-213ENST00000566221 CUEDC2Q9H467 287 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
SPG7-213ENST00000566221 HAS3O00219 553 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
SPG7-213ENST00000566221 TFRCP02786 760 aaKnown RBP16.52■□□□□ 0.24
SPG7-213ENST00000566221 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.24
SPG7-213ENST00000566221 ATP4AP20648 1035 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 YWHABP31946 246 aaKnown RBP16.52■□□□□ 0.24
SPG7-213ENST00000566221 PSEN2P49810 448 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 ACLYP53396 1101 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 MFSD10Q14728 455 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 PLCB4Q15147 1175 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 E2F4Q16254 413 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 OTUD6AQ7L8S5 288 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 IQUBQ8NA54 791 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 DHX58Q96C10 678 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 PLIN2Q99541 437 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 MAGEF1Q9HAY2 307 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 NRBP2Q9NSY0 501 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 ANKEF1Q9NU02 776 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.24
SPG7-213ENST00000566221 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
SPG7-213ENST00000566221 PHF24Q9UPV7 400 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 TRPC6Q9Y210 931 aa16.52■□□□□ 0.24
SPG7-213ENST00000566221 COL1A2P08123 1366 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 DLL1O00548 723 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 HBP1O60381 514 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 EYA4O95677 639 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 KIAA0753Q2KHM9 967 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 KCNK18Q7Z418 384 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
SPG7-213ENST00000566221 ANKLE1Q8NAG6 615 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 LARP4BQ92615 738 aaKnown RBP16.51■□□□□ 0.23
SPG7-213ENST00000566221 RAD54LQ92698 747 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
SPG7-213ENST00000566221 PPME1Q9Y570 386 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms