RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 AGO3Q9H9G7 860 aaKnown RBP7.28□□□□□ -1.24
TCF4-228ENST00000565393 NCOA5Q9HCD5 579 aaKnown RBP7.28□□□□□ -1.24
TCF4-228ENST00000565393 ZSWIM6Q9HCJ5 1215 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 PDRG1Q9NUG6 133 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 VPS54Q9P1Q0 977 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 GABBR1Q9UBS5 961 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 LRFN2Q9ULH4 789 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 PADI3Q9ULW8 664 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 TRPV2Q9Y5S1 764 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 LCTP09848 1927 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 IGKV6D-21A0A0A0MT36 114 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 ESYT2A0FGR8 921 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 H3BNC9 293 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 DHX15O43143 795 aaKnown RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 STAG3L1P0CL83 205 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 IFNAR1P17181 557 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 CTNNB1P35222 781 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 USP11P51784 963 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 PAK2Q13177 524 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 MKRN4PQ13434 485 aaPredicted RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 NTRK3Q16288 839 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 TMEM266Q2M3C6 531 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 ODR4Q5SWX8 454 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 ZNF746Q6NUN9 644 aaPredicted RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 RTN4RL1Q86UN2 441 aaPredicted RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 FBXL16Q8N461 479 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 BANK1Q8NDB2 785 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 CCDC148Q8NFR7 591 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 SP7Q8TDD2 431 aaPredicted RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 ATP8B4Q8TF62 1192 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 MRPL38Q96DV4 380 aaKnown RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 ZNF274Q96GC6 653 aaPredicted RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 PPP1R16BQ96T49 567 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 FTHL17Q9BXU8 183 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 RNF26Q9BY78 433 aaPredicted RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 UPF3BQ9BZI7 483 aaKnown RBP7.27□□□□□ -1.25
TCF4-228ENST00000565393 CDHR5Q9HBB8 845 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 NRBP2Q9NSY0 501 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 PCDHB7Q9Y5E2 793 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 PCDHA10Q9Y5I2 948 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 SQORQ9Y6N5 450 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 LAMA4Q16363 1823 aa7.27□□□□□ -1.25
TCF4-228ENST00000565393 IGLV3-22A0A075B6J6 115 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 DENND3A2RUS2 1198 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 GPR182O15218 404 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 CHMP2AO43633 222 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 RPS6KA5O75582 802 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 DGKIO75912 1065 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 CSPG5O95196 566 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 RB1P06400 928 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 ATP4AP20648 1035 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 KCNA5P22460 613 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 EVCP57679 992 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 SETQ01105 290 aaPredicted RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 TOB2Q14106 344 aaPredicted RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 KIZQ2M2Z5 673 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 SPOUT1Q5T280 376 aaKnown RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 EFCAB12Q6NXP0 572 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 CCDC60Q8IWA6 550 aaPredicted RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 SMAP1Q8IYB5 467 aaPredicted RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 KIAA0319LQ8IZA0 1049 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 MICAL1Q8TDZ2 1067 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 TBCKQ8TEA7 893 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 BBXQ8WY36 941 aaPredicted RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 AGXT2Q9BYV1 514 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 C22orf23Q9BZE7 217 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 IGFLR1Q9H665 355 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 UBE2ZQ9H832 354 aaPredicted RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 ALG13Q9NP73 1137 aaKnown RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 SH3GLB2Q9NR46 395 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 NOC2LQ9Y3T9 749 aaKnown RBP7.26□□□□□ -1.25
TCF4-228ENST00000565393 RWDD3Q9Y3V2 267 aa7.26□□□□□ -1.25
TCF4-228ENST00000565393 WDR64B1ANS9 1081 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 GRM6O15303 877 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 MSH4O15457 936 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 MAGEB2O15479 319 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 EPB41L2O43491 1005 aaKnown RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 MARCH6O60337 910 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 GAS7O60861 476 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 DEXIO95424 95 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 TMOD1P28289 359 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 CIITAP33076 1130 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 CRYBB1P53674 252 aaPredicted RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 NLRP11P59045 1033 aaKnown RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 PAN2Q504Q3 1202 aaKnown RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 TCEAL5Q5H9L2 206 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 NPAS4Q8IUM7 802 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 BLIDQ8IZY5 108 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 CRYGNQ8WXF5 182 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 ZNF689Q96CS4 500 aaPredicted RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 RIT2Q99578 217 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 ADAM2Q99965 735 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 C11orf84Q9BUA3 381 aaPredicted RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 TEKT3Q9BXF9 490 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 TM6SF1Q9BZW5 370 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 SLKQ9H2G2 1235 aaPredicted RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 DISC1Q9NRI5 854 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 RNF216Q9NWF9 866 aaPredicted RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 PPP4R2Q9NY27 417 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms