RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 FAM169AQ9Y6X4 670 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 MYH10P35580 1976 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.95□□□□□ -1.14
SMG1-210ENST00000565224 PDXKO00764 312 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 FLOT1O75955 427 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 XRCC5P13010 732 aaKnown RBP7.95□□□□□ -1.14
SMG1-210ENST00000565224 SLC9A1P19634 815 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 HSPA9P38646 679 aaKnown RBP7.95□□□□□ -1.14
SMG1-210ENST00000565224 NOP2P46087 812 aaKnown RBP7.95□□□□□ -1.14
SMG1-210ENST00000565224 SPIRE1Q08AE8 756 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 EXOC3L4Q17RC7 722 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 EMC10Q5UCC4 262 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 EPM2AIP1Q7L775 607 aaPredicted RBP7.95□□□□□ -1.14
SMG1-210ENST00000565224 SFR1Q86XK3 245 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 CATSPER3Q86XQ3 398 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 KLHL7Q8IXQ5 586 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 LRRC57Q8N9N7 239 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 ETNPPLQ8TBG4 499 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 ACTRT1Q8TDG2 376 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 CRAMP1Q96RY5 1269 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 REEP2Q9BRK0 252 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 MXD3Q9BW11 206 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 ISCUQ9H1K1 167 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 TAF1DQ9H5J8 278 aaPredicted RBP7.95□□□□□ -1.14
SMG1-210ENST00000565224 RABEP2Q9H5N1 569 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 DNM3Q9UQ16 869 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 ATP8B3O60423 1300 aa7.95□□□□□ -1.14
SMG1-210ENST00000565224 NDUFAB1O14561 156 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 TBX3O15119 743 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 SLC16A3O15427 465 aaKnown RBP7.94□□□□□ -1.14
SMG1-210ENST00000565224 ZEB2O60315 1214 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 NR1D1P20393 614 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 PON1P27169 355 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 PRKCIP41743 596 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 ATP1A2P50993 1020 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 ARHGAP4P98171 946 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 PABPC4Q13310 644 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG1-210ENST00000565224 CUL1Q13616 776 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 Q4G0T1 1027 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 PRR16Q569H4 304 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 ALKBH5Q6P6C2 394 aaKnown RBP7.94□□□□□ -1.14
SMG1-210ENST00000565224 CERS5Q8N5B7 392 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 SYT2Q8N9I0 419 aaPredicted RBP7.94□□□□□ -1.14
SMG1-210ENST00000565224 DCAF4Q8WV16 495 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
SMG1-210ENST00000565224 ATP6V1G3Q96LB4 118 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 RNPC3Q96LT9 517 aaKnown RBP7.94□□□□□ -1.14
SMG1-210ENST00000565224 CCDC17Q96LX7 622 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 CAMKK2Q96RR4 588 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 METTL14Q9HCE5 456 aaKnown RBP7.94□□□□□ -1.14
SMG1-210ENST00000565224 NAGPAQ9UK23 515 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 FBXL5Q9UKA1 691 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 STK24Q9Y6E0 443 aa7.94□□□□□ -1.14
SMG1-210ENST00000565224 ATXN2Q99700 1313 aaKnown RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 HMGB1P1B2RPK0 211 aaPredicted RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 PGRMC1O00264 195 aaKnown RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 MEIS2O14770 477 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 RIMBP2O15034 1052 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 RAD21O60216 631 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 CEP104O60308 925 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 AKAP3O75969 853 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 APBA3O96018 575 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 SPATA31C1P0DKV0 1188 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 GYS1P13807 737 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 RPL13P26373 211 aaKnown RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 RPA1P27694 616 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 HOXD13P35453 343 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 PSMC6P62333 389 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 ERVK-9P63128 1117 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 HLTFQ14527 1009 aaKnown RBP eCLIP7.93□□□□□ -1.141e-7■□□□□ 9.5
SMG1-210ENST00000565224 EPHA7Q15375 998 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 TRADDQ15628 312 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 BMT2Q1RMZ1 405 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 DCAF17Q5H9S7 520 aaPredicted RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 MCTP2Q6DN12 878 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 CDC42EP5Q6NZY7 148 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 LRIG3Q6UXM1 1119 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 B4GALNT4Q76KP1 1039 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 MAATS1Q7Z4T9 603 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 VPS36Q86VN1 386 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 DHX37Q8IY37 1157 aaKnown RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 MICALL1Q8N3F8 863 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 SCFD2Q8WU76 684 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 CRYGNQ8WXF5 182 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 TYW1Q9NV66 732 aaKnown RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 NENFQ9UMX5 172 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 PLAAQ9Y263 795 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 MYH7BA7E2Y1 1941 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 TAF1LQ8IZX4 1826 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 GOLGA6L10A6NI86 522 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 MEIS1O00470 390 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 PPEF1O14829 653 aaPredicted RBP7.93□□□□□ -1.14
SMG1-210ENST00000565224 ERLIN2O94905 339 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 NR3C1P04150 777 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 ECHS1P30084 290 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 LSP1P33241 339 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 JAM2P57087 298 aa7.93□□□□□ -1.14
SMG1-210ENST00000565224 SLFN13Q68D06 897 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms