RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NLRC5Q86WI3 1866 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 TTC3P53804 2025 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 ADGRA3Q8IWK6 1321 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 IGSF9BQ9UPX0 1349 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 RALGAPA2Q2PPJ7 1873 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 IGLV3-22A0A075B6J6 115 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 KLF18A0A0U1RQI7 1052 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 SMIM35A0A1B0GVV1 85 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 GOLGA8AA7E2F4 631 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 GOLGA8BA8MQT2 603 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 ZBTB42B2RXF5 422 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 FAM86B1E9PN63 330 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 hCG_1984214I3L0E3 225 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 GPR37L1O60883 481 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 FAM86B2P0C5J1 330 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 CPA1P15085 419 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 ATP4AP20648 1035 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 CTNNB1P35222 781 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 ADCY7P51828 1080 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 TMEM62Q0P6H9 643 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 AP3B2Q13367 1082 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 MTHFD1LQ6UB35 978 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 GJD3Q8N144 294 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 NME8Q8N427 588 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 ZNF713Q8N859 430 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-213ENST00000565173 SDF4Q9BRK5 362 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 CELF4Q9BZC1 486 aaKnown RBP9.79□□□□□ -0.84
CAPN3-213ENST00000565173 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 KDM3AQ9Y4C1 1321 aa9.79□□□□□ -0.84
CAPN3-213ENST00000565173 ATG2AQ2TAZ0 1938 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 MYO7AQ13402 2215 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 CYP3A4P08684 503 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 KLRC1P26715 233 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 SLC26A2P50443 739 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 RCAN1P53805 252 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 DLX2Q07687 328 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 HYAL1Q12794 435 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 BTG3Q14201 252 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 KRT32Q14532 448 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 PKN1Q16512 942 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 PFKFB3Q16875 520 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 PUS10Q3MIT2 529 aaKnown RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 TMEM31Q5JXX7 168 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 CENPQQ7L2Z9 268 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 CCDC60Q8IWA6 550 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 KIAA0319LQ8IZA0 1049 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 TNPO1Q92973 898 aaKnown RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 C11orf84Q9BUA3 381 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 FTHL17Q9BXU8 183 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 ZMYND12Q9H0C1 365 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 LMAN2LQ9H0V9 348 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 GLT8D2Q9H1C3 349 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 CDHR5Q9HBB8 845 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 ALG13Q9NP73 1137 aaKnown RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 PLAGL2Q9UPG8 496 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 RWDD3Q9Y3V2 267 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 TRPV2Q9Y5S1 764 aa9.78□□□□□ -0.84
CAPN3-213ENST00000565173 MRPL42Q9Y6G3 142 aaKnown RBP9.78□□□□□ -0.84
CAPN3-213ENST00000565173 FAM86C2PA6NEL3 165 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 IPO5O00410 1097 aaKnown RBP9.77□□□□□ -0.85
CAPN3-213ENST00000565173 NCK2O43639 380 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 EDIL3O43854 480 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 HBP1O60381 514 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 MGEA5O60502 916 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 CDC45O75419 566 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 HMGB1P09429 215 aaKnown RBP9.77□□□□□ -0.85
CAPN3-213ENST00000565173 DNAJB1P25685 340 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
CAPN3-213ENST00000565173 PLA2G5P39877 138 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 GATMP50440 423 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 KRT76Q01546 638 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 APOBRQ0VD83 1088 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 TMEM266Q2M3C6 531 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 SWSAP1Q6NVH7 229 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 PLA2G4DQ86XP0 818 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 NPAS4Q8IUM7 802 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 CMTR2Q8IYT2 770 aaKnown RBP9.77□□□□□ -0.85
CAPN3-213ENST00000565173 FBXL16Q8N461 479 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 SPPL3Q8TCT6 385 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 ATP8B4Q8TF62 1192 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 TMEM40Q8WWA1 233 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 P2RX5Q93086 422 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 UIMC1Q96RL1 719 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 AGXT2Q9BYV1 514 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 ERVK-5Q9HDB9 667 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 CLDND1Q9NY35 253 aa9.77□□□□□ -0.85
CAPN3-213ENST00000565173 NID2Q14112 1375 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 LOXHD1Q8IVV2 1947 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 ESYT2A0FGR8 921 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 M0QZ92 97 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 DDX39AO00148 427 aaKnown RBP9.76□□□□□ -0.85
CAPN3-213ENST00000565173 LINC01565O15544 149 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 MMP1P03956 469 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 ITGB1P05556 798 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 SCG2P13521 617 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 ZNF76P36508 570 aa9.76□□□□□ -0.85
CAPN3-213ENST00000565173 METAP2P50579 478 aaKnown RBP eCLIP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms