RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 POLR3CQ9BUI4 534 aaPredicted RBP18.98■□□□□ 0.63
CMTM3-208ENST00000564247 SEZ6LQ9BYH1 1024 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 UBE2OQ9C0C9 1292 aaKnown RBP18.98■□□□□ 0.63
CMTM3-208ENST00000564247 NT5C3AQ9H0P0 336 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 PCDH10Q9P2E7 1040 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 HPSEQ9Y251 543 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 TRIM43BA6NCK2 446 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 NOP56O00567 594 aaKnown RBP18.97■□□□□ 0.63
CMTM3-208ENST00000564247 KIAA0355O15063 1070 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 POLR2DO15514 142 aaKnown RBP18.97■□□□□ 0.63
CMTM3-208ENST00000564247 TRAK2O60296 914 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 DKC1O60832 514 aaKnown RBP eCLIP18.97■□□□□ 0.63
CMTM3-208ENST00000564247 LIG1P18858 919 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 ACTR2P61160 394 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 FAAP100Q0VG06 881 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 BRDTQ58F21 947 aaPredicted RBP18.97■□□□□ 0.63
CMTM3-208ENST00000564247 KCTD17Q8N5Z5 321 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 PDILTQ8N807 584 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 IQUBQ8NA54 791 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 SLC43A3Q8NBI5 491 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 GPT2Q8TD30 523 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 SEPT1Q8WYJ6 367 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 TRIM43Q96BQ3 446 aaPredicted RBP18.97■□□□□ 0.63
CMTM3-208ENST00000564247 SPATA33Q96N06 139 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 GOLPH3LQ9H4A5 285 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 BCAS3Q9H6U6 928 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 TUFT1Q9NNX1 390 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 USP25Q9UHP3 1055 aa18.97■□□□□ 0.63
CMTM3-208ENST00000564247 A6NJR5 290 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 KINO60870 393 aaKnown RBP18.96■□□□□ 0.63
CMTM3-208ENST00000564247 ZNF202O95125 648 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 CCNE2O96020 404 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 P4HBP07237 508 aaKnown RBP18.96■□□□□ 0.63
CMTM3-208ENST00000564247 MUTP22033 750 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 RPA1P27694 616 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 KARSQ15046 597 aaKnown RBP18.96■□□□□ 0.63
CMTM3-208ENST00000564247 TPH2Q8IWU9 490 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 TDHQ8IZJ6 230 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 FMR1NBQ8N0W7 255 aaPredicted RBP18.96■□□□□ 0.63
CMTM3-208ENST00000564247 COPS5Q92905 334 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 HSD17B14Q9BPX1 270 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 MMTAG2Q9BU76 263 aaKnown RBP18.96■□□□□ 0.63
CMTM3-208ENST00000564247 TMEM39AQ9NV64 488 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 SZT2Q5T011 3432 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 DOCK5Q9H7D0 1870 aa18.96■□□□□ 0.63
CMTM3-208ENST00000564247 LAMA2P24043 3122 aaKnown RBP18.96■□□□□ 0.63
CMTM3-208ENST00000564247 KPNA6O60684 536 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 NR1I2O75469 434 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 SLITRK3O94933 977 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 STAT6P42226 847 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 QARSP47897 775 aaKnown RBP18.95■□□□□ 0.62
CMTM3-208ENST00000564247 ITGA7Q13683 1181 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 KLHL40Q2TBA0 621 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 KANK3Q6NY19 840 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 ABHD15Q6UXT9 468 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 CATSPER3Q86XQ3 398 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 FAM126BQ8IXS8 530 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 CEP57L1Q8IYX8 460 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 ENGASEQ8NFI3 743 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 EMID1Q96A84 441 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-208ENST00000564247 DYDC2Q96IM9 177 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 DDX19AQ9NUU7 478 aaKnown RBP18.95■□□□□ 0.62
CMTM3-208ENST00000564247 DACT1Q9NYF0 836 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 RGL1Q9NZL6 768 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 KIAA1024Q9UPX6 916 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 SCN10AQ9Y5Y9 1956 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 GRIN2DO15399 1336 aa18.95■□□□□ 0.62
CMTM3-208ENST00000564247 BACH1O14867 736 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 MED24O75448 989 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 ATG7O95352 703 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 SUPT20HL2P0C7V6 817 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 PURAQ00577 322 aaKnown RBP18.94■□□□□ 0.62
CMTM3-208ENST00000564247 CYP4A11Q02928 519 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 ARHGAP1Q07960 439 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 SNW1Q13573 536 aaKnown RBP18.94■□□□□ 0.62
CMTM3-208ENST00000564247 HYIQ5T013 277 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 FAM160B1Q5W0V3 765 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 SWSAP1Q6NVH7 229 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 CNNM3Q8NE01 707 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 BADQ92934 168 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 ATP6V0A1Q93050 837 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 SYAP1Q96A49 352 aaPredicted RBP18.94■□□□□ 0.62
CMTM3-208ENST00000564247 DHX58Q96C10 678 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 TIGD1Q96MW7 591 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 NACC1Q96RE7 527 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 PLIN2Q99541 437 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 CUEDC2Q9H467 287 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 AZI2Q9H6S1 392 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 ZSWIM4Q9H7M6 989 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 TBX21Q9UL17 535 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 DNM3Q9UQ16 869 aa18.94■□□□□ 0.62
CMTM3-208ENST00000564247 GSTTP1A0A1W2PQM5 241 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 TLR3O15455 904 aaKnown RBP18.93■□□□□ 0.62
CMTM3-208ENST00000564247 CD4P01730 458 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 MYL3P08590 195 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 SPATA31C1P0DKV0 1188 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 RAG1P15918 1043 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 PLCG1P19174 1290 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 ITGB8P26012 769 aa18.93■□□□□ 0.62
CMTM3-208ENST00000564247 PSMC5P62195 406 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms