RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 MMP1P03956 469 aa22.43■■□□□ 1.18
CMTM3-207ENST00000564060 FAM26DQ5JW98 314 aa22.43■■□□□ 1.18
CMTM3-207ENST00000564060 BBXQ8WY36 941 aaPredicted RBP22.43■■□□□ 1.18
CMTM3-207ENST00000564060 SEMA6BQ9H3T3 888 aa22.43■■□□□ 1.18
CMTM3-207ENST00000564060 DISC1Q9NRI5 854 aa22.43■■□□□ 1.18
CMTM3-207ENST00000564060 CEP131Q9UPN4 1083 aa22.43■■□□□ 1.18
CMTM3-207ENST00000564060 PCDHA11Q9Y5I1 949 aa22.43■■□□□ 1.18
CMTM3-207ENST00000564060 MAFBQ9Y5Q3 323 aaPredicted RBP22.43■■□□□ 1.18
CMTM3-207ENST00000564060 IGSF9BQ9UPX0 1349 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 KIF28PB7ZC32 967 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 M0QZ92 97 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 ST3GAL1Q11201 340 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 MBTPS1Q14703 1052 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 SAFBQ15424 915 aaKnown RBP eCLIP22.42■■□□□ 1.18
CMTM3-207ENST00000564060 ZNF484Q5JVG2 852 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 MARCH8Q5T0T0 291 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 OXER1Q8TDS5 423 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 SEPT8Q92599 483 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 APBB2Q92870 758 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 FAM161BQ96MY7 647 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 GABBR1Q9UBS5 961 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 STXBP5LQ9Y2K9 1186 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 PCDHA2Q9Y5H9 948 aa22.42■■□□□ 1.18
CMTM3-207ENST00000564060 CCNT1O60563 726 aaKnown RBP22.41■■□□□ 1.18
CMTM3-207ENST00000564060 DTNBO60941 627 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 PSMD10O75832 226 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 PBX2P40425 430 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 WDR5P61964 334 aaKnown RBP22.41■■□□□ 1.18
CMTM3-207ENST00000564060 PLEKHG4Q58EX7 1191 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 IER5Q5VY09 327 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 KRT40Q6A162 431 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 RUFY4Q6ZNE9 571 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 ETNPPLQ8TBG4 499 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 DNAJB3Q8WWF6 145 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 FAM20AQ96MK3 541 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 TTYH1Q9H313 450 aaPredicted RBP22.41■■□□□ 1.18
CMTM3-207ENST00000564060 ZNF576Q9H609 170 aa22.41■■□□□ 1.18
CMTM3-207ENST00000564060 SMIM35A0A1B0GVV1 85 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 TBX3O15119 743 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 CHMP2AO43633 222 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 NR5A1Q13285 461 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 MIER3Q7Z3K6 550 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 DIS3L2Q8IYB7 885 aaKnown RBP22.4■■□□□ 1.18
CMTM3-207ENST00000564060 FAM184AQ8NB25 1140 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 DBF4BQ8NFT6 615 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 UNC45AQ9H3U1 944 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 SLC28A3Q9HAS3 691 aa22.4■■□□□ 1.18
CMTM3-207ENST00000564060 MARCH6O60337 910 aa22.39■■□□□ 1.17
CMTM3-207ENST00000564060 MRPS6P82932 125 aaKnown RBP22.39■■□□□ 1.17
CMTM3-207ENST00000564060 MTHFD1LQ6UB35 978 aa22.39■■□□□ 1.17
CMTM3-207ENST00000564060 HERC6Q8IVU3 1022 aa22.39■■□□□ 1.17
CMTM3-207ENST00000564060 NME8Q8N427 588 aa22.39■■□□□ 1.17
CMTM3-207ENST00000564060 C8orf76Q96K31 380 aa22.39■■□□□ 1.17
CMTM3-207ENST00000564060 GUCD1Q96NT3 240 aa22.39■■□□□ 1.17
CMTM3-207ENST00000564060 FAM49AQ9H0Q0 323 aaPredicted RBP22.39■■□□□ 1.17
CMTM3-207ENST00000564060 MYO9BQ13459 2157 aa22.39■■□□□ 1.17
CMTM3-207ENST00000564060 SLC37A4O43826 429 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 MCM2P49736 904 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 TRAPPC12Q8WVT3 735 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 TNFRSF25Q93038 417 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 TBC1D32Q96NH3 1257 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 IFIH1Q9BYX4 1025 aaKnown RBP22.38■■□□□ 1.17
CMTM3-207ENST00000564060 KCNMB3Q9NPA1 279 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 NRBP2Q9NSY0 501 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 KIF3AQ9Y496 699 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 SQORQ9Y6N5 450 aa22.38■■□□□ 1.17
CMTM3-207ENST00000564060 BTBD18B2RXH4 712 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 BAG4O95429 457 aaKnown RBP22.37■■□□□ 1.17
CMTM3-207ENST00000564060 CHRNA1P02708 482 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 AMHP03971 560 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 OATP04181 439 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 ATP4AP20648 1035 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 KLRC1P26715 233 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 FOSBP53539 338 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 RABGGTBP53611 331 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 MGAT3Q09327 533 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 PPP2R2DQ66LE6 453 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 B3GNT9Q6UX72 402 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 SLFN12Q8IYM2 578 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 USP38Q8NB14 1042 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 CDX2Q99626 313 aaPredicted RBP22.37■■□□□ 1.17
CMTM3-207ENST00000564060 NKX2-4Q9H2Z4 354 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 TRPV2Q9Y5S1 764 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 CDY2AQ9Y6F7 541 aa22.37■■□□□ 1.17
CMTM3-207ENST00000564060 MAGEB2O15479 319 aa22.36■■□□□ 1.17
CMTM3-207ENST00000564060 DKC1O60832 514 aaKnown RBP eCLIP22.36■■□□□ 1.17
CMTM3-207ENST00000564060 PRKCEQ02156 737 aa22.36■■□□□ 1.17
CMTM3-207ENST00000564060 PPP2R5CQ13362 524 aa22.36■■□□□ 1.17
CMTM3-207ENST00000564060 GJA10Q969M2 543 aa22.36■■□□□ 1.17
CMTM3-207ENST00000564060 ZBED2Q9BTP6 218 aa22.36■■□□□ 1.17
CMTM3-207ENST00000564060 YBX2Q9Y2T7 364 aaKnown RBP22.36■■□□□ 1.17
CMTM3-207ENST00000564060 TLL1O43897 1013 aa22.35■■□□□ 1.17
CMTM3-207ENST00000564060 EARS2Q5JPH6 523 aaKnown RBP22.35■■□□□ 1.17
CMTM3-207ENST00000564060 TSHZ1Q6ZSZ6 1077 aa22.35■■□□□ 1.17
CMTM3-207ENST00000564060 FAM43BQ6ZT52 329 aaPredicted RBP22.35■■□□□ 1.17
CMTM3-207ENST00000564060 KDM3AQ9Y4C1 1321 aa22.34■■□□□ 1.17
CMTM3-207ENST00000564060 GHRP10912 638 aa22.34■■□□□ 1.17
CMTM3-207ENST00000564060 DEFB103AP81534 67 aa22.34■■□□□ 1.17
CMTM3-207ENST00000564060 GNL2Q13823 731 aaKnown RBP22.34■■□□□ 1.17
CMTM3-207ENST00000564060 FBXO47Q5MNV8 452 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms