RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 LMAN2LQ9H0V9 348 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 NSUN3Q9H649 340 aaKnown RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 ZNF302Q9NR11 478 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 TBC1D22BQ9NU19 505 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 GINS2Q9Y248 185 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 ESYT2A0FGR8 921 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 IPO5O00410 1097 aaKnown RBP10.85□□□□□ -0.67
CLN6-203ENST00000563917 SSTR3P32745 418 aaPredicted RBP10.85□□□□□ -0.67
CLN6-203ENST00000563917 BMPR1AP36894 532 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 KRT76Q01546 638 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 TMEM62Q0P6H9 643 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 FUT2Q10981 343 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
CLN6-203ENST00000563917 LEXMQ3ZCV2 418 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 ZNF484Q5JVG2 852 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 MARCH8Q5T0T0 291 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 TRIM22Q8IYM9 498 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 CELF4Q9BZC1 486 aaKnown RBP10.85□□□□□ -0.67
CLN6-203ENST00000563917 TMEM260Q9NX78 707 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
CLN6-203ENST00000563917 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 DENND3A2RUS2 1198 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 PRPF3O43395 683 aaKnown RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 PSAPP07602 524 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 CYP3A4P08684 503 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 IBSPP21815 317 aaPredicted RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 KLRC1P26715 233 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 CDC27P30260 824 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 CLK2P49760 499 aaKnown RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 SWSAP1Q6NVH7 229 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 CPLX2Q6PUV4 134 aaKnown RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 MTHFD1LQ6UB35 978 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 NPAS4Q8IUM7 802 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 SMAP1Q8IYB5 467 aaPredicted RBP10.84□□□□□ -0.67
CLN6-203ENST00000563917 TRAPPC12Q8WVT3 735 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 PCYT2Q99447 389 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 PLVAPQ9BX97 442 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 C22orf23Q9BZE7 217 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 OSBPL7Q9BZF2 842 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 ZMYND12Q9H0C1 365 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 PADI3Q9ULW8 664 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 CEP131Q9UPN4 1083 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 COL1A2P08123 1366 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 NCOR1O75376 2440 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
CLN6-203ENST00000563917 CHD7Q9P2D1 2997 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 COL4A6Q14031 1691 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 FAM86B1E9PN63 330 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 C5orf67F2Z3F1 127 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 CPLX1O14810 134 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 GPR182O15218 404 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 RPS6KA5O75582 802 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 ATG7O95352 703 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 FAM86B2P0C5J1 330 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 CPA1P15085 419 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 RPS6KB1P23443 525 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 TMOD1P28289 359 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 HSPA4P34932 840 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 TCEAL5Q5H9L2 206 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 SPOUT1Q5T280 376 aaKnown RBP10.83□□□□□ -0.68
CLN6-203ENST00000563917 ABHD15Q6UXT9 468 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 SKAP1Q86WV1 359 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 CMTR2Q8IYT2 770 aaKnown RBP10.83□□□□□ -0.68
CLN6-203ENST00000563917 METTL13Q8N6R0 699 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
CLN6-203ENST00000563917 PABPC5Q96DU9 382 aaKnown RBP10.83□□□□□ -0.68
CLN6-203ENST00000563917 FAM167AQ96KS9 214 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 SLC26A6Q9BXS9 759 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 RNF26Q9BY78 433 aaPredicted RBP10.83□□□□□ -0.68
CLN6-203ENST00000563917 AGO3Q9H9G7 860 aaKnown RBP10.83□□□□□ -0.68
CLN6-203ENST00000563917 AAASQ9NRG9 546 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 FAM217BQ9NTX9 383 aaPredicted RBP10.83□□□□□ -0.68
CLN6-203ENST00000563917 CLDND1Q9NY35 253 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 PCDHB7Q9Y5E2 793 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 PCDHA10Q9Y5I2 948 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 SNX14Q9Y5W7 946 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 KDM3AQ9Y4C1 1321 aa10.83□□□□□ -0.68
CLN6-203ENST00000563917 IGKV6D-21A0A0A0MT36 114 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 WDR64B1ANS9 1081 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 H3BQ06 376 aaPredicted RBP10.82□□□□□ -0.68
CLN6-203ENST00000563917 MAGEB2O15479 319 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 DGKIO75912 1065 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 CCNE2O96020 404 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 NEFLP07196 543 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 NLRP5P59047 1200 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 PRR16Q569H4 304 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 TMEM31Q5JXX7 168 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 TRMT1LQ7Z2T5 733 aaKnown RBP10.82□□□□□ -0.68
CLN6-203ENST00000563917 CCDC60Q8IWA6 550 aaPredicted RBP10.82□□□□□ -0.68
CLN6-203ENST00000563917 GJD3Q8N144 294 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 FBXL16Q8N461 479 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 KCNB2Q92953 911 aa10.82□□□□□ -0.68
CLN6-203ENST00000563917 CLP1Q92989 425 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms