RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 MMEP08473 750 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 ZCCHC8Q6NZY4 707 aaKnown RBP5.53□□□□□ -1.52
GDE1-202ENST00000563645 ARHGEF18Q6ZSZ5 1173 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 C2orf69Q8N8R5 385 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 DLG3Q92796 817 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 BOCQ9BWV1 1114 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 KATNBL1Q9H079 304 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 GALNT8Q9NY28 637 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 ESYT3A0FGR9 886 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 FOXP2O15409 715 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 CUTAO60888 179 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 ASMTLO95671 621 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 ADRB1P08588 477 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 POLD1P28340 1107 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 SDHAP31040 664 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 MECP2P51608 486 aaKnown RBP5.52□□□□□ -1.53
GDE1-202ENST00000563645 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 PPP2CBP62714 309 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 PPP2CAP67775 309 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 IL13RA1P78552 427 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 NFKB2Q00653 900 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 IRF9Q00978 393 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 TOP3AQ13472 1001 aaPredicted RBP5.52□□□□□ -1.53
GDE1-202ENST00000563645 WDR72Q3MJ13 1102 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 GLB1LQ6UWU2 654 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 OTOP1Q7RTM1 612 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 GPR155Q7Z3F1 870 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 IFNL2Q8IZJ0 200 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 TTC9BQ8N6N2 239 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 ASB15Q8WXK1 588 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 SAMD11Q96NU1 681 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 SSBP3Q9BWW4 388 aaPredicted RBP5.52□□□□□ -1.53
GDE1-202ENST00000563645 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 PPP4R1LQ9P1A2 415 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 TNPO3Q9Y5L0 923 aaKnown RBP5.52□□□□□ -1.53
GDE1-202ENST00000563645 SLC4A7Q9Y6M7 1214 aa5.52□□□□□ -1.53
GDE1-202ENST00000563645 RASSF10A6NK89 507 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 M0R2C6 588 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 PPP1R12AO14974 1030 aaPredicted RBP5.51□□□□□ -1.53
GDE1-202ENST00000563645 OPA1O60313 960 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 B4GALT4O60513 344 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 RFPL3O75679 317 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 GLRX3O76003 335 aaKnown RBP5.51□□□□□ -1.53
GDE1-202ENST00000563645 CNOT4O95628 575 aaKnown RBP5.51□□□□□ -1.53
GDE1-202ENST00000563645 ZNF460Q14592 562 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 USP10Q14694 798 aaKnown RBP5.51□□□□□ -1.53
GDE1-202ENST00000563645 STILQ15468 1287 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 ARHGAP44Q17R89 818 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 CXXC5Q7LFL8 322 aaKnown RBP5.51□□□□□ -1.53
GDE1-202ENST00000563645 SYNPOQ8N3V7 929 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 CHST14Q8NCH0 376 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 LOXL4Q96JB6 756 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 RNPC3Q96LT9 517 aaKnown RBP5.51□□□□□ -1.53
GDE1-202ENST00000563645 GBP4Q96PP9 640 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 BTBD2Q9BX70 525 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 AMNQ9BXJ7 453 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 MEGF9Q9H1U4 602 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 UCKL1Q9NWZ5 548 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 SMPD4Q9NXE4 827 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 FBXO10Q9UK96 956 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 ASB1Q9Y576 335 aa5.51□□□□□ -1.53
GDE1-202ENST00000563645 NPEPPSL1A6NEC2 478 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 ZBTB48P10074 688 aaPredicted RBP5.5□□□□□ -1.53
GDE1-202ENST00000563645 ECE1P42892 770 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 ETV4P43268 484 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 MAGEA10P43363 369 aaPredicted RBP5.5□□□□□ -1.53
GDE1-202ENST00000563645 PABPC4Q13310 644 aaKnown RBP eCLIP5.5□□□□□ -1.53
GDE1-202ENST00000563645 TMEM132BQ14DG7 1078 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 CATSPEREQ5SY80 951 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 SLFN13Q68D06 897 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 LIMS2Q7Z4I7 341 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 HIPK4Q8NE63 616 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 UBE2Q2Q8WVN8 375 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 WNK4Q96J92 1243 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 CARD11Q9BXL7 1154 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 JADE2Q9NQC1 790 aa5.5□□□□□ -1.53
GDE1-202ENST00000563645 PRAMEF22A3QJZ6 481 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 KRT37O76014 449 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 ZNF888P0CJ79 500 aaPredicted RBP5.49□□□□□ -1.53
GDE1-202ENST00000563645 SDSP20132 328 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 FLT3P36888 993 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 ADCY8P40145 1251 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 ADAM17P78536 824 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 TCEA2Q15560 299 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 ZNF568Q3ZCX4 644 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 KANK2Q63ZY3 851 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 CC2D1AQ6P1N0 951 aaPredicted RBP5.49□□□□□ -1.53
GDE1-202ENST00000563645 LRSAM1Q6UWE0 723 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 CIR1Q86X95 450 aaPredicted RBP5.49□□□□□ -1.53
GDE1-202ENST00000563645 HOMER1Q86YM7 354 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 WDR48Q8TAF3 677 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 ZDHHC5Q9C0B5 715 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 OR10A5Q9H207 317 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 SEC61A2Q9H9S3 476 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 CABP5Q9NP86 173 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 PTPN22Q9Y2R2 807 aa5.49□□□□□ -1.53
GDE1-202ENST00000563645 GPR42O15529 346 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 HMGCRP04035 888 aa5.48□□□□□ -1.53
GDE1-202ENST00000563645 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms