RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 SQORQ9Y6N5 450 aa19.69■□□□□ 0.74
TSC2-219ENST00000563346 ADGRA3Q8IWK6 1321 aa19.69■□□□□ 0.74
TSC2-219ENST00000563346 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.68■□□□□ 0.74
TSC2-219ENST00000563346 ATG7O95352 703 aa19.68■□□□□ 0.74
TSC2-219ENST00000563346 HSPA4P34932 840 aa19.68■□□□□ 0.74
TSC2-219ENST00000563346 BTG3Q14201 252 aaPredicted RBP19.68■□□□□ 0.74
TSC2-219ENST00000563346 MCTP2Q6DN12 878 aa19.68■□□□□ 0.74
TSC2-219ENST00000563346 KCNB2Q92953 911 aa19.68■□□□□ 0.74
TSC2-219ENST00000563346 CCDC136Q96JN2 1154 aa19.68■□□□□ 0.74
TSC2-219ENST00000563346 FTHL17Q9BXU8 183 aa19.68■□□□□ 0.74
TSC2-219ENST00000563346 SNX14Q9Y5W7 946 aa19.68■□□□□ 0.74
TSC2-219ENST00000563346 SMIM35A0A1B0GVV1 85 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 ESYT2A0FGR8 921 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 FAM86C2PA6NEL3 165 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 FAM86B1E9PN63 330 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 IPO5O00410 1097 aaKnown RBP19.67■□□□□ 0.74
TSC2-219ENST00000563346 CCNE2O96020 404 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 RB1P06400 928 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 FAM86B2P0C5J1 330 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 GNA11P29992 359 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 PAK2Q13177 524 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 LEXMQ3ZCV2 418 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 MIS18BP1Q6P0N0 1132 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 MTHFD1LQ6UB35 978 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 EP400NLQ6ZTU2 488 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 REXO1Q8N1G1 1221 aaKnown RBP19.67■□□□□ 0.74
TSC2-219ENST00000563346 NME8Q8N427 588 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 UIMC1Q96RL1 719 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 LRFN3Q9BTN0 628 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 C11orf84Q9BUA3 381 aaPredicted RBP19.67■□□□□ 0.74
TSC2-219ENST00000563346 CELF4Q9BZC1 486 aaKnown RBP19.67■□□□□ 0.74
TSC2-219ENST00000563346 ZMYND12Q9H0C1 365 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 NSUN3Q9H649 340 aaKnown RBP19.67■□□□□ 0.74
TSC2-219ENST00000563346 ZNF302Q9NR11 478 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 TCEAL9Q9UHQ7 104 aa19.67■□□□□ 0.74
TSC2-219ENST00000563346 IGKV6D-21A0A0A0MT36 114 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 PRPF3O43395 683 aaKnown RBP19.66■□□□□ 0.74
TSC2-219ENST00000563346 HBP1O60381 514 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 REC8O95072 547 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 CYP3A4P08684 503 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 RPS6KB1P23443 525 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 KLRC1P26715 233 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 PSMA5P28066 241 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 BMPR1AP36894 532 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 SETQ01105 290 aaPredicted RBP19.66■□□□□ 0.74
TSC2-219ENST00000563346 KRT76Q01546 638 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 TCEAL5Q5H9L2 206 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 PDXDC2PQ6P474 469 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 ABHD15Q6UXT9 468 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 CKAP2LQ8IYA6 745 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 ATP8B4Q8TF62 1192 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 ZNF577Q9BSK1 485 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 PADI3Q9ULW8 664 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 IGSF9BQ9UPX0 1349 aa19.66■□□□□ 0.74
TSC2-219ENST00000563346 C5orf67F2Z3F1 127 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 DGKIO75912 1065 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 SWSAP1Q6NVH7 229 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 CCDC60Q8IWA6 550 aaPredicted RBP19.65■□□□□ 0.74
TSC2-219ENST00000563346 BICD2Q8TD16 824 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 LINC01599Q8WXQ3 324 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 PHKBQ93100 1093 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 LMAN2LQ9H0V9 348 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 RC3H2Q9HBD1 1191 aaKnown RBP19.65■□□□□ 0.74
TSC2-219ENST00000563346 TBC1D22BQ9NU19 505 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 GINS2Q9Y248 185 aa19.65■□□□□ 0.74
TSC2-219ENST00000563346 IGLV3-22A0A075B6J6 115 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 DHX15O43143 795 aaKnown RBP19.64■□□□□ 0.73
TSC2-219ENST00000563346 STAG3L1P0CL83 205 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 NFX1Q12986 1120 aaKnown RBP19.64■□□□□ 0.73
TSC2-219ENST00000563346 PKN1Q16512 942 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 PUS10Q3MIT2 529 aaKnown RBP19.64■□□□□ 0.73
TSC2-219ENST00000563346 ZNF484Q5JVG2 852 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 PTCRAQ6ISU1 281 aaPredicted RBP19.64■□□□□ 0.73
TSC2-219ENST00000563346 NPAS4Q8IUM7 802 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 CCDC148Q8NFR7 591 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.64■□□□□ 0.73
TSC2-219ENST00000563346 CRYGNQ8WXF5 182 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 KHSRPQ92945 711 aaKnown RBP eCLIP19.64■□□□□ 0.73
TSC2-219ENST00000563346 ZNF689Q96CS4 500 aaPredicted RBP19.64■□□□□ 0.73
TSC2-219ENST00000563346 SLC26A6Q9BXS9 759 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 LRFN2Q9ULH4 789 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 HCN4Q9Y3Q4 1203 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 KDM3AQ9Y4C1 1321 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 COL1A2P08123 1366 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 NID2Q14112 1375 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 LOXHD1Q8IVV2 1947 aa19.64■□□□□ 0.73
TSC2-219ENST00000563346 TTC3P53804 2025 aa19.63■□□□□ 0.73
TSC2-219ENST00000563346 PPFIA3O75145 1194 aa19.63■□□□□ 0.73
TSC2-219ENST00000563346 IBSPP21815 317 aaPredicted RBP19.63■□□□□ 0.73
TSC2-219ENST00000563346 HOXD11P31277 338 aaPredicted RBP19.63■□□□□ 0.73
TSC2-219ENST00000563346 PRR16Q569H4 304 aa19.63■□□□□ 0.73
TSC2-219ENST00000563346 ZNF746Q6NUN9 644 aaPredicted RBP19.63■□□□□ 0.73
TSC2-219ENST00000563346 RTN4RL1Q86UN2 441 aaPredicted RBP19.63■□□□□ 0.73
TSC2-219ENST00000563346 FBXL16Q8N461 479 aa19.63■□□□□ 0.73
TSC2-219ENST00000563346 CLP1Q92989 425 aaKnown RBP19.63■□□□□ 0.73
TSC2-219ENST00000563346 PABPC5Q96DU9 382 aaKnown RBP19.63■□□□□ 0.73
TSC2-219ENST00000563346 RNF26Q9BY78 433 aaPredicted RBP19.63■□□□□ 0.73
TSC2-219ENST00000563346 H3BQ06 376 aaPredicted RBP19.62■□□□□ 0.73
TSC2-219ENST00000563346 ADAMTS3O15072 1205 aa19.62■□□□□ 0.73
TSC2-219ENST00000563346 GRM6O15303 877 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms