RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 FGD1P98174 961 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 MCTP2Q6DN12 878 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 POTEBQ6S5H4 581 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 MTHFD1LQ6UB35 978 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 RTN4RL1Q86UN2 441 aaPredicted RBP14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 NME8Q8N427 588 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 FBXL16Q8N461 479 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 NEK9Q8TD19 979 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 TRAPPC12Q8WVT3 735 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 FTHL17Q9BXU8 183 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 CELF4Q9BZC1 486 aaKnown RBP14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 RWDD3Q9Y3V2 267 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 ADGRA3Q8IWK6 1321 aa14.38□□□□□ -0.11
ABCD1P3-201ENST00000562927 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 SIP14410 1827 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 IGLV3-22A0A075B6J6 115 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 ESYT2A0FGR8 921 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 M0QZ92 97 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 SCG2P13521 617 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 HSPA4P34932 840 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 CTNNB1P35222 781 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 TMEM62Q0P6H9 643 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 APOBRQ0VD83 1088 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 BTG3Q14201 252 aaPredicted RBP14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 TCEAL5Q5H9L2 206 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 JAKMIP3Q5VZ66 844 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 FAM43BQ6ZT52 329 aaPredicted RBP14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 Q6ZUG5 572 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 PLA2G4DQ86XP0 818 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 LINC01599Q8WXQ3 324 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 C11orf84Q9BUA3 381 aaPredicted RBP14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 ZMYND12Q9H0C1 365 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 NSUN3Q9H649 340 aaKnown RBP14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 EPHX3Q9H6B9 360 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 CD320Q9NPF0 282 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 NAP1L2Q9ULW6 460 aaPredicted RBP14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 PADI3Q9ULW8 664 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 TRPV2Q9Y5S1 764 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 IGSF9BQ9UPX0 1349 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 KDM3AQ9Y4C1 1321 aa14.37□□□□□ -0.11
ABCD1P3-201ENST00000562927 GRXCR2A6NFK2 248 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 BACH1O14867 736 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 ADAMTS3O15072 1205 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 GRM6O15303 877 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 HBP1O60381 514 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 KLRC1P26715 233 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 KRT76Q01546 638 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 PKN1Q16512 942 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 PUS10Q3MIT2 529 aaKnown RBP14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 FAM160B1Q5W0V3 765 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 PTCRAQ6ISU1 281 aaPredicted RBP14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 FAM178BQ8IXR5 827 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 ATP8B4Q8TF62 1192 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 KHSRPQ92945 711 aaKnown RBP eCLIP14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 BRF1Q92994 677 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 PABPC5Q96DU9 382 aaKnown RBP14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 LMAN2LQ9H0V9 348 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 C6orf50Q9HD87 102 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 RAPGEFL1Q9UHV5 662 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 SNX14Q9Y5W7 946 aa14.36□□□□□ -0.11
ABCD1P3-201ENST00000562927 NID2Q14112 1375 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 DDX39AO00148 427 aaKnown RBP14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 PRPF3O43395 683 aaKnown RBP14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 NCK2O43639 380 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 ATP4AP20648 1035 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 PAK2Q13177 524 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 ZNF484Q5JVG2 852 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 SWSAP1Q6NVH7 229 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 MIS18BP1Q6P0N0 1132 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 NPAS4Q8IUM7 802 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 CCDC60Q8IWA6 550 aaPredicted RBP14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 KIAA0319LQ8IZA0 1049 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 REXO1Q8N1G1 1221 aaKnown RBP14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 CCDC12Q8WUD4 166 aaPredicted RBP14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 PLVAPQ9BX97 442 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 AGXT2Q9BYV1 514 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 ZNF302Q9NR11 478 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 TBC1D22BQ9NU19 505 aa14.35□□□□□ -0.11
ABCD1P3-201ENST00000562927 COL1A2P08123 1366 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 ZBTB42B2RXF5 422 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 PI4K2BG5E9Z4 385 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 STAG3L1P0CL83 205 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 IL9P15248 144 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 RPS6KB1P23443 525 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 GNA11P29992 359 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 NTRK3Q16288 839 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 CTC1Q2NKJ3 1217 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 ZNF746Q6NUN9 644 aaPredicted RBP14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 PDXDC2PQ6P474 469 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 CMTR2Q8IYT2 770 aaKnown RBP14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 GJD3Q8N144 294 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 P2RX5Q93086 422 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 ZNF577Q9BSK1 485 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 TMX1Q9H3N1 280 aa14.34□□□□□ -0.11
ABCD1P3-201ENST00000562927 PLAGL2Q9UPG8 496 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms