RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 HOXD8P13378 290 aaPredicted RBP15.5■□□□□ 0.07
CLK3-209ENST00000562670 RARRES1P49788 294 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 SLC26A2P50443 739 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 ARHGAP1Q07960 439 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 IQCB1Q15051 598 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 DUSP28Q4G0W2 176 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 FAM160B1Q5W0V3 765 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 RINT1Q6NUQ1 792 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 C1orf186Q6ZWK4 172 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 CCDC65Q8IXS2 484 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 DHX37Q8IY37 1157 aaKnown RBP15.5■□□□□ 0.07
CLK3-209ENST00000562670 PPTC7Q8NI37 304 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 PIGOQ8TEQ8 1089 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 GPR20Q99678 358 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 BCAS3Q9H6U6 928 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 CBX8Q9HC52 389 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 GABBR1Q9UBS5 961 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 DOCK3Q8IZD9 2030 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.49■□□□□ 0.07
CLK3-209ENST00000562670 ARHGEF35A5YM69 484 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 ZNF862O60290 1169 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 STBD1O95210 358 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 SSBP05455 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
CLK3-209ENST00000562670 ZNF131P52739 623 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 PRKCEQ02156 737 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 XKR3Q5GH77 459 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 FOXR2Q6PJQ5 311 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 OTUD6AQ7L8S5 288 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 PLPPR4Q7Z2D5 763 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 FAM167AQ96KS9 214 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 ZNF302Q9NR11 478 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 PDGFCQ9NRA1 345 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 SEL1LQ9UBV2 794 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 ZSWIM8A7E2V4 1837 aa15.49■□□□□ 0.07
CLK3-209ENST00000562670 A0A087WWV3 80 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 NOP56O00567 594 aaKnown RBP15.48■□□□□ 0.07
CLK3-209ENST00000562670 BACH1O14867 736 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 TBC1D8O95759 1140 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 ZNF865P0CJ78 1059 aaPredicted RBP15.48■□□□□ 0.07
CLK3-209ENST00000562670 GAP43P17677 238 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 TCF7P36402 384 aaPredicted RBP15.48■□□□□ 0.07
CLK3-209ENST00000562670 COASYQ13057 564 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 GIT2Q14161 759 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 DHX8Q14562 1220 aaKnown RBP15.48■□□□□ 0.07
CLK3-209ENST00000562670 HSDL1Q3SXM5 330 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 SWSAP1Q6NVH7 229 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 ANO5Q75V66 913 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 SPATA33Q96N06 139 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 PCYT2Q99447 389 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 REEP2Q9BRK0 252 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 FLRT1Q9NZU1 646 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 Q9Y3F1 56 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 COL4A3BPQ9Y5P4 624 aa15.48■□□□□ 0.07
CLK3-209ENST00000562670 SMTNL1A8MU46 457 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 PPP1R3GB7ZBB8 358 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 TBCAO75347 108 aaKnown RBP15.47■□□□□ 0.07
CLK3-209ENST00000562670 TRPA1O75762 1119 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 OATP04181 439 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 KRT18P05783 430 aaKnown RBP15.47■□□□□ 0.07
CLK3-209ENST00000562670 CYP2B6P20813 491 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 ADCYAP1R1P41586 468 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 MYL5Q02045 173 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 STIM1Q13586 685 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 FAM26FQ5R3K3 315 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 PADI6Q6TGC4 694 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 DYMQ7RTS9 669 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 DHX40Q8IX18 779 aaKnown RBP15.47■□□□□ 0.07
CLK3-209ENST00000562670 ADSSL1Q8N142 457 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 RNF214Q8ND24 703 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 ENOX1Q8TC92 643 aaKnown RBP15.47■□□□□ 0.07
CLK3-209ENST00000562670 CCDC43Q96MW1 224 aaKnown RBP15.47■□□□□ 0.07
CLK3-209ENST00000562670 NIFKQ9BYG3 293 aaKnown RBP15.47■□□□□ 0.07
CLK3-209ENST00000562670 ARHGAP39Q9C0H5 1083 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 AZI2Q9H6S1 392 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 PANK4Q9NVE7 773 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 ZHX1Q9UKY1 873 aaPredicted RBP15.47■□□□□ 0.07
CLK3-209ENST00000562670 TELO2Q9Y4R8 837 aa15.47■□□□□ 0.07
CLK3-209ENST00000562670 MYH9P35579 1960 aaKnown RBP15.46■□□□□ 0.07
CLK3-209ENST00000562670 GPR25O00155 361 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 IDEP14735 1019 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 SMPD1P17405 629 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 HOXD10P28358 340 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 FLT3LGP49771 235 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 STAT5BP51692 787 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 PRMT2P55345 433 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 SP4Q02446 784 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 ARHGEF6Q15052 776 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 CCL14Q16627 93 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 GUF1Q8N442 669 aaKnown RBP15.46■□□□□ 0.07
CLK3-209ENST00000562670 KIAA0895Q8NCT3 520 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 ERO1AQ96HE7 468 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 DHTKD1Q96HY7 919 aaPredicted RBP15.46■□□□□ 0.07
CLK3-209ENST00000562670 SMARCAD1Q9H4L7 1026 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 RWDD2AQ9UIY3 292 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 GNEQ9Y223 722 aaKnown RBP15.46■□□□□ 0.07
CLK3-209ENST00000562670 GDAQ9Y2T3 454 aa15.46■□□□□ 0.07
CLK3-209ENST00000562670 PCDHA2Q9Y5H9 948 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms