RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 KATNA1O75449 491 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 FAHP16930 419 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 GUCY2FP51841 1108 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 BTBD8Q5XKL5 378 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 TTLL6Q8N841 843 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 SMC1BQ8NDV3 1235 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 COG1Q8WTW3 980 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 CHTF18Q8WVB6 975 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 GPR101Q96P66 508 aaPredicted RBP8.64□□□□□ -1.03
SMG1-204ENST00000561940 TTC1Q99614 292 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 SMURF1Q9HCE7 757 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 RIC8BQ9NVN3 520 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 THG1LQ9NWX6 298 aaKnown RBP8.64□□□□□ -1.03
SMG1-204ENST00000561940 H2AFY2Q9P0M6 372 aaPredicted RBP8.64□□□□□ -1.03
SMG1-204ENST00000561940 B4GALT6Q9UBX8 382 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 PTPDC1A2A3K4 754 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 FAM90A27PA6NNH2 459 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 DDX3XO00571 662 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMG1-204ENST00000561940 GSTA4O15217 222 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 ATP2A2P16615 1042 aaKnown RBP8.63□□□□□ -1.03
SMG1-204ENST00000561940 HOXA5P20719 270 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 IL2P60568 153 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 RTP5Q14D33 572 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 CREB3L3Q68CJ9 461 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 PROSER1Q86XN7 944 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 KIF18BQ86Y91 864 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 TTLL11Q8NHH1 800 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 IFT22Q9H7X7 185 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 CABP5Q9NP86 173 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 G3BP2Q9UN86 482 aaKnown RBP8.63□□□□□ -1.03
SMG1-204ENST00000561940 SRPK3Q9UPE1 567 aa8.63□□□□□ -1.03
SMG1-204ENST00000561940 PHLDB1Q86UU1 1377 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 WASHC2CQ9Y4E1 1318 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.62□□□□□ -1.03
SMG1-204ENST00000561940 CPEP16870 476 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 GLRBP48167 497 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 EPHA5P54756 1037 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 NT5DC1Q5TFE4 455 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 PRAMEF18Q5VWM3 479 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 MCTP2Q6DN12 878 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 VASNQ6EMK4 673 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 TTLL10Q6ZVT0 673 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 CLIC6Q96NY7 704 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 TRIM8Q9BZR9 551 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 XYLT2Q9H1B5 865 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 LUC7LQ9NQ29 371 aaKnown RBP8.62□□□□□ -1.03
SMG1-204ENST00000561940 SPTLC3Q9NUV7 552 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 ATP23Q9Y6H3 246 aa8.62□□□□□ -1.03
SMG1-204ENST00000561940 ALG1L2C9J202 215 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 GAS7O60861 476 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 KRT37O76014 449 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 FKBP9O95302 570 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 S100BP04271 92 aaPredicted RBP8.61□□□□□ -1.03
SMG1-204ENST00000561940 PTPN1P18031 435 aaKnown RBP8.61□□□□□ -1.03
SMG1-204ENST00000561940 RPL13P26373 211 aaKnown RBP8.61□□□□□ -1.03
SMG1-204ENST00000561940 MLLT6P55198 1093 aaPredicted RBP8.61□□□□□ -1.03
SMG1-204ENST00000561940 MTMR1Q13613 665 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 CPZQ66K79 652 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 FKBP9P1Q75LS8 142 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 SP8Q8IXZ3 490 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 NLGN4XQ8N0W4 816 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 C2orf69Q8N8R5 385 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 ADAM7Q9H2U9 754 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 ZKSCAN5Q9Y2L8 839 aa8.61□□□□□ -1.03
SMG1-204ENST00000561940 SCDO00767 359 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 BRINP1O60477 761 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 IL13P35225 146 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 LACTBP83111 547 aaPredicted RBP8.6□□□□□ -1.03
SMG1-204ENST00000561940 EXOSC10Q01780 885 aaKnown RBP8.6□□□□□ -1.03
SMG1-204ENST00000561940 PFKPQ01813 784 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 SART3Q15020 963 aaKnown RBP8.6□□□□□ -1.03
SMG1-204ENST00000561940 ODR4Q5SWX8 454 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 RNF219Q5W0B1 726 aaPredicted RBP8.6□□□□□ -1.03
SMG1-204ENST00000561940 CD276Q5ZPR3 534 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 SPATS2Q86XZ4 545 aaKnown RBP8.6□□□□□ -1.03
SMG1-204ENST00000561940 ADAMTS17Q8TE56 1095 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 C20orf173Q96LM9 149 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 TMEM209Q96SK2 561 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 SLC39A2Q9NP94 309 aa8.6□□□□□ -1.03
SMG1-204ENST00000561940 APOBEC2Q9Y235 224 aaKnown RBP8.6□□□□□ -1.03
SMG1-204ENST00000561940 SKIDA1Q1XH10 827 aa8.59□□□□□ -1.03
SMG1-204ENST00000561940 PRR31Q5SQ13 230 aa8.59□□□□□ -1.03
SMG1-204ENST00000561940 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
SMG1-204ENST00000561940 ZNF761Q86XN6 746 aaPredicted RBP8.59□□□□□ -1.03
SMG1-204ENST00000561940 RAVER1Q8IY67 606 aaKnown RBP8.59□□□□□ -1.03
SMG1-204ENST00000561940 ASPSCR1Q9BZE9 553 aa8.59□□□□□ -1.03
SMG1-204ENST00000561940 CCDC8Q9H0W5 538 aaPredicted RBP8.59□□□□□ -1.03
SMG1-204ENST00000561940 METTL14Q9HCE5 456 aaKnown RBP8.59□□□□□ -1.03
SMG1-204ENST00000561940 EMC7Q9NPA0 242 aa8.59□□□□□ -1.03
SMG1-204ENST00000561940 USP40Q9NVE5 1235 aa8.59□□□□□ -1.03
SMG1-204ENST00000561940 OXSMQ9NWU1 459 aa8.59□□□□□ -1.03
SMG1-204ENST00000561940 THRAP3Q9Y2W1 955 aaKnown RBP8.59□□□□□ -1.03
SMG1-204ENST00000561940 A0A0G2JLL6 359 aaPredicted RBP8.58□□□□□ -1.04
SMG1-204ENST00000561940 ZEB2O60315 1214 aa8.58□□□□□ -1.04
SMG1-204ENST00000561940 MARCH6O60337 910 aa8.58□□□□□ -1.04
SMG1-204ENST00000561940 ENO2P09104 434 aaPredicted RBP8.58□□□□□ -1.04
SMG1-204ENST00000561940 SEC23AQ15436 765 aa8.58□□□□□ -1.04
SMG1-204ENST00000561940 RGL3Q3MIN7 710 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms