RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CCNFP41002 786 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 CRKP46108 304 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 BBS9Q3SYG4 887 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 OTUD7BQ6GQQ9 843 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 OVOS1Q6IE37 1185 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 AGBL3Q8NEM8 1001 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 TCTN2Q96GX1 697 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 MAP6Q96JE9 813 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 MRS2Q9HD23 443 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 CRTAC1Q9NQ79 661 aa5.05□□□□□ -1.6
HERC1-211ENST00000560983 ZMYND8Q9ULU4 1186 aaPredicted RBP5.05□□□□□ -1.6
HERC1-211ENST00000560983 SUPT16HQ9Y5B9 1047 aaKnown RBP5.05□□□□□ -1.6
HERC1-211ENST00000560983 NCANO14594 1321 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 WNT10BO00744 389 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 TNFRSF10CO14798 259 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 TLR3O15455 904 aaKnown RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 SNRPA1P09661 255 aaKnown RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 SYN1P17600 705 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 PRMT2P55345 433 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 GPSM2P81274 684 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 LACTBP83111 547 aaPredicted RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 SNW1Q13573 536 aaKnown RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 GRAPQ13588 217 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 CLEC16AQ2KHT3 1053 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 TMC3Q7Z5M5 1100 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 ZNF605Q86T29 641 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 REXO1Q8N1G1 1221 aaKnown RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 GRAPLQ8TC17 118 aaPredicted RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 ATG4CQ96DT6 458 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 PAWRQ96IZ0 340 aaKnown RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 FOXP3Q9BZS1 431 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 ADAMTS1Q9UHI8 967 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 GPR160Q9UJ42 338 aa5.04□□□□□ -1.6
HERC1-211ENST00000560983 IBTKQ9P2D0 1353 aaPredicted RBP5.04□□□□□ -1.6
HERC1-211ENST00000560983 CACNA1AO00555 2505 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 UNCXA6NJT0 531 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 SIGLEC6O43699 453 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 NUAK1O60285 661 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 USP2O75604 605 aaPredicted RBP5.03□□□□□ -1.6
HERC1-211ENST00000560983 INHBBP09529 407 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 PDIA4P13667 645 aaKnown RBP5.03□□□□□ -1.6
HERC1-211ENST00000560983 RAG1P15918 1043 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 POLR2BP30876 1174 aaKnown RBP5.03□□□□□ -1.6
HERC1-211ENST00000560983 NF2P35240 595 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 YBX1P67809 324 aaKnown RBP5.03□□□□□ -1.6
HERC1-211ENST00000560983 RAD51AP2Q09MP3 1159 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 TEFQ10587 303 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 TTLL7Q6ZT98 887 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 C7orf61Q8IZ16 206 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 FAM43AQ8N2R8 423 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 USP38Q8NB14 1042 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 TBC1D16Q8TBP0 767 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 BRI3BPQ8WY22 251 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 SRRDQ9UH36 339 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 MBD1Q9UIS9 605 aaPredicted RBP5.03□□□□□ -1.6
HERC1-211ENST00000560983 TCFL5Q9UL49 500 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 RIPOR2Q9Y4F9 1068 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 DUOX1Q9NRD9 1551 aa5.03□□□□□ -1.6
HERC1-211ENST00000560983 MAP3K15Q6ZN16 1313 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 OR14I1A6ND48 311 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 TLR2O60603 784 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 PRAMEF1O95521 474 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 TFRCP02786 760 aaKnown RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 HMOX1P09601 288 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 GALK1P51570 392 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 PCBP3P57721 371 aaKnown RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 CCDC27Q2M243 656 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 DDX46Q7L014 1031 aaKnown RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 NLRC3Q7RTR2 1065 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 SLITRK4Q8IW52 837 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 NGEFQ8N5V2 710 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 DIS3LQ8TF46 1054 aaKnown RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 FCRL2Q96LA5 508 aaPredicted RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 C20orf173Q96LM9 149 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 LRFN3Q9BTN0 628 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 PRDM14Q9GZV8 571 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 ASCC2Q9H1I8 757 aaPredicted RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 TTYH1Q9H313 450 aaPredicted RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 PRR13Q9NZ81 148 aa5.02□□□□□ -1.61
HERC1-211ENST00000560983 POLR2AP24928 1970 aaKnown RBP5.02□□□□□ -1.61
HERC1-211ENST00000560983 PIEZO1Q92508 2521 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 KDM3BQ7LBC6 1761 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 FADS2P1A8MWK0 482 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 PRRG2O14669 202 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 NME1P15531 152 aaKnown RBP5.01□□□□□ -1.61
HERC1-211ENST00000560983 PNLIPP16233 465 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 CAPN2P17655 700 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 HOXA5P20719 270 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 RPL10P27635 214 aaKnown RBP5.01□□□□□ -1.61
HERC1-211ENST00000560983 ERVFRD-1P60508 538 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 CLCQ05315 142 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 C17orf99Q6UX52 265 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 PPP1R42Q7Z4L9 355 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 NECAB2Q7Z6G3 386 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 TMEM192Q8IY95 271 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 CELF1Q92879 486 aaKnown RBP5.01□□□□□ -1.61
HERC1-211ENST00000560983 ZBED3Q96IU2 234 aaPredicted RBP5.01□□□□□ -1.61
HERC1-211ENST00000560983 DEFB118Q96PH6 123 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms