RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 LINC00271P0C7V0 271 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 STK3Q13188 491 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 LPIN1Q14693 890 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 TSHZ1Q6ZSZ6 1077 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 HEATR3Q7Z4Q2 680 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 PHKBQ93100 1093 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 EHMT1Q9H9B1 1298 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 TPCN1Q9ULQ1 816 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 TRIOO75962 3097 aa12.25□□□□□ -0.45
TPM1-227ENST00000560970 SPDYE3A6NKU9 549 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 STXBP3O00186 592 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 EIF5BO60841 1220 aaKnown RBP12.24□□□□□ -0.45
TPM1-227ENST00000560970 DTNBO60941 627 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 MMP1P03956 469 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 RB1P06400 928 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 ALADP13716 330 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 ITGB5P18084 799 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 MRPS6P82932 125 aaKnown RBP12.24□□□□□ -0.45
TPM1-227ENST00000560970 ZP2Q05996 745 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 PKN1Q16512 942 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 UBE2SQ16763 222 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 FBXO47Q5MNV8 452 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 WDFY4Q6ZS81 3184 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 EP400NLQ6ZTU2 488 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 GLG1Q92896 1179 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 CLP1Q92989 425 aaKnown RBP12.24□□□□□ -0.45
TPM1-227ENST00000560970 PSTPIP2Q9H939 334 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 JPH1Q9HDC5 661 aaPredicted RBP12.24□□□□□ -0.45
TPM1-227ENST00000560970 CLDND1Q9NY35 253 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 PRKAG3Q9UGI9 489 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 CDY2AQ9Y6F7 541 aa12.24□□□□□ -0.45
TPM1-227ENST00000560970 V9GY48 417 aaPredicted RBP12.24□□□□□ -0.45
TPM1-227ENST00000560970 CCDC196A0A1B0GTZ2 297 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 NCK2O43639 380 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 ATP9AO75110 1047 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 IFNAR1P17181 557 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 SCRN1Q12765 414 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 DNAJB3Q8WWF6 145 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 SEPT1Q8WYJ6 367 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 ZNF274Q96GC6 653 aaPredicted RBP12.23□□□□□ -0.45
TPM1-227ENST00000560970 C22orf23Q9BZE7 217 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 SMARCAD1Q9H4L7 1026 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 UBIAD1Q9Y5Z9 338 aa12.23□□□□□ -0.45
TPM1-227ENST00000560970 GSTTP1A0A1W2PQM5 241 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 M0QZ92 97 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 GRM6O15303 877 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 DCXO43602 365 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 TBX10O75333 385 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 SCG2P13521 617 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 RBM25P49756 843 aaKnown RBP12.22□□□□□ -0.45
TPM1-227ENST00000560970 NEK4P51957 841 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 NAPAP54920 295 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 IGBP1P78318 339 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 ST3GAL1Q11201 340 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 BTG3Q14201 252 aaPredicted RBP12.22□□□□□ -0.45
TPM1-227ENST00000560970 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
TPM1-227ENST00000560970 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 MARCH8Q5T0T0 291 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 ADHFE1Q8IWW8 467 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 CMTR2Q8IYT2 770 aaKnown RBP12.22□□□□□ -0.45
TPM1-227ENST00000560970 LINC01599Q8WXQ3 324 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 ZNF689Q96CS4 500 aaPredicted RBP12.22□□□□□ -0.45
TPM1-227ENST00000560970 POP1Q99575 1024 aaKnown RBP12.22□□□□□ -0.45
TPM1-227ENST00000560970 PLVAPQ9BX97 442 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 JADE2Q9NQC1 790 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 BARHL2Q9NY43 387 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 TRPV2Q9Y5S1 764 aa12.22□□□□□ -0.45
TPM1-227ENST00000560970 DENND4AQ7Z401 1863 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 ARID2Q68CP9 1835 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 NFASCO94856 1347 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 PRPF3O43395 683 aaKnown RBP12.21□□□□□ -0.45
TPM1-227ENST00000560970 PFKFB2O60825 505 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 DGKIO75912 1065 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 CSPG5O95196 566 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 BMPR1AP36894 532 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 HYAL1Q12794 435 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 PAK2Q13177 524 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 SMAD4Q13485 552 aaKnown RBP12.21□□□□□ -0.45
TPM1-227ENST00000560970 ME3Q16798 604 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 IER5Q5VY09 327 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 NPAS4Q8IUM7 802 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 P2RX5Q93086 422 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 PGBD1Q96JS3 809 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 SDF4Q9BRK5 362 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 RNF26Q9BY78 433 aaPredicted RBP12.21□□□□□ -0.45
TPM1-227ENST00000560970 FAM49AQ9H0Q0 323 aaPredicted RBP12.21□□□□□ -0.45
TPM1-227ENST00000560970 AZI2Q9H6S1 392 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 SLC9A2Q9UBY0 812 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 PCDHA6Q9UN73 950 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 PCDHA8Q9Y5H6 950 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms