RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 POLR3CQ9BUI4 534 aaPredicted RBP16.05■□□□□ 0.16
CRTC3-210ENST00000560927 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
CRTC3-210ENST00000560927 PDXKO00764 312 aa16.05■□□□□ 0.16
CRTC3-210ENST00000560927 CHMP2AO43633 222 aa16.05■□□□□ 0.16
CRTC3-210ENST00000560927 GCNT3O95395 438 aa16.05■□□□□ 0.16
CRTC3-210ENST00000560927 SYF2O95926 243 aaKnown RBP16.05■□□□□ 0.16
CRTC3-210ENST00000560927 HNRNPH2P55795 449 aaKnown RBP16.05■□□□□ 0.16
CRTC3-210ENST00000560927 SLC7A5Q01650 507 aa16.05■□□□□ 0.16
CRTC3-210ENST00000560927 ASIC2Q16515 512 aa16.05■□□□□ 0.16
CRTC3-210ENST00000560927 DCAF17Q5H9S7 520 aaPredicted RBP16.05■□□□□ 0.16
CRTC3-210ENST00000560927 VIPAS39Q9H9C1 493 aa16.05■□□□□ 0.16
CRTC3-210ENST00000560927 CLIC2O15247 247 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 PPIP5K2O43314 1243 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 EYA4O95677 639 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 FTCDO95954 541 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 NR3C1P04150 777 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 DNA2P51530 1060 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 ITIH3Q06033 890 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 NAB2Q15742 525 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 HSP90B2PQ58FF3 399 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 CCDC181Q5TID7 509 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 RINT1Q6NUQ1 792 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 OTOP1Q7RTM1 612 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 TXLNBQ8N3L3 684 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 FAM71BQ8TC56 605 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 HSD17B14Q9BPX1 270 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 CALUO43852 315 aaPredicted RBP16.04■□□□□ 0.16
CRTC3-210ENST00000560927 TBCAO75347 108 aaKnown RBP16.04■□□□□ 0.16
CRTC3-210ENST00000560927 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
CRTC3-210ENST00000560927 UCHL3P15374 230 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 PON1P27169 355 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 PTK2Q05397 1052 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 KIAA0753Q2KHM9 967 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 IRF2BP2Q7Z5L9 587 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 TPH2Q8IWU9 490 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 CDAN1Q8IWY9 1227 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 RIN2Q8WYP3 895 aaPredicted RBP16.04■□□□□ 0.16
CRTC3-210ENST00000560927 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 DYDC2Q96IM9 177 aa16.04■□□□□ 0.16
CRTC3-210ENST00000560927 RBM12Q9NTZ6 932 aaKnown RBP16.04■□□□□ 0.16
CRTC3-210ENST00000560927 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
CRTC3-210ENST00000560927 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
CRTC3-210ENST00000560927 SLITRK3O94933 977 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 XRCC5P13010 732 aaKnown RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 ZYXQ15942 572 aaKnown RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 BMT2Q1RMZ1 405 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 TCERG1LQ5VWI1 586 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 PSD3Q9NYI0 1048 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 AJAP1Q9UKB5 411 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 TGFB1I1O43294 461 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 C21orf2O43822 256 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 PSMD10O75832 226 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 NMT1P30419 496 aaKnown RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 EXOC3L4Q17RC7 722 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 LRCH2Q5VUJ6 765 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 ZNF571Q7Z3V5 609 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 AENQ8WTP8 325 aaKnown RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 ACBD3Q9H3P7 528 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 ARHGEF10LQ9HCE6 1279 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 MED4Q9NPJ6 270 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 PLCB1Q9NQ66 1216 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 HERC5Q9UII4 1024 aaKnown RBP16.03■□□□□ 0.16
CRTC3-210ENST00000560927 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
CRTC3-210ENST00000560927 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
CRTC3-210ENST00000560927 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
CRTC3-210ENST00000560927 EPHA7Q15375 998 aa16.02■□□□□ 0.16
CRTC3-210ENST00000560927 ZC2HC1CQ53FD0 456 aaPredicted RBP16.02■□□□□ 0.16
CRTC3-210ENST00000560927 CCDC70Q6NSX1 233 aa16.02■□□□□ 0.16
CRTC3-210ENST00000560927 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.02■□□□□ 0.16
CRTC3-210ENST00000560927 KSR1Q8IVT5 923 aa16.02■□□□□ 0.16
CRTC3-210ENST00000560927 SLC35C1Q96A29 364 aa16.02■□□□□ 0.16
CRTC3-210ENST00000560927 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
CRTC3-210ENST00000560927 PCDHB13Q9Y5F0 798 aa16.02■□□□□ 0.16
CRTC3-210ENST00000560927 ZMYM2Q9UBW7 1377 aa16.02■□□□□ 0.15
CRTC3-210ENST00000560927 RNF40O75150 1001 aa16.02■□□□□ 0.15
CRTC3-210ENST00000560927 PAFAH1B1P43034 410 aa16.02■□□□□ 0.15
CRTC3-210ENST00000560927 SPAG5Q96R06 1193 aa16.02■□□□□ 0.15
CRTC3-210ENST00000560927 SIX2Q9NPC8 291 aa16.02■□□□□ 0.15
CRTC3-210ENST00000560927 PCDHGC5Q9Y5F6 944 aa16.02■□□□□ 0.15
CRTC3-210ENST00000560927 COL2A1P02458 1487 aaPredicted RBP16.01■□□□□ 0.15
CRTC3-210ENST00000560927 RAD17O75943 681 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 GGCXP38435 758 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 GJB7Q6PEY0 223 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 C1orf186Q6ZWK4 172 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 FAM204AQ9H8W3 233 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
CRTC3-210ENST00000560927 OLFML3Q9NRN5 406 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 ZBTB21Q9ULJ3 1066 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 GRID2IPA4D2P6 1211 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 GCOM1H8Y6P7 765 aaPredicted RBP16.01■□□□□ 0.15
CRTC3-210ENST00000560927 AGPSO00116 658 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 POLR2MP0CAP2 368 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 COG2Q14746 738 aa16.01■□□□□ 0.15
CRTC3-210ENST00000560927 MYCT1Q8N699 235 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms