RNA–Protein interactions for RNA: ENST00000560779.5

RMDN3-210, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 3

Gene RMDN3, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-210ENST00000560779 CCL23P55773 120 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 RILPL1Q5EBL4 403 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 ZNF484Q5JVG2 852 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 MARCH8Q5T0T0 291 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 MCTP1Q6DN14 999 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 PSRC1Q6PGN9 363 aaPredicted RBP15.15■□□□□ 0.02
RMDN3-210ENST00000560779 CKAP2LQ8IYA6 745 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 RPUSD2Q8IZ73 545 aaKnown RBP15.15■□□□□ 0.02
RMDN3-210ENST00000560779 MTMR9Q96QG7 549 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 PCDHA12Q9UN75 941 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 CEP131Q9UPN4 1083 aa15.15■□□□□ 0.02
RMDN3-210ENST00000560779 ZNF862O60290 1169 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 OATP04181 439 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 ATP2B1P20020 1258 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 PRKCEQ02156 737 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 EPHA7Q15375 998 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 LRRC8DQ7L1W4 858 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 WNT8BQ93098 351 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 TTC12Q9H892 705 aaPredicted RBP15.14■□□□□ 0.01
RMDN3-210ENST00000560779 NRBP2Q9NSY0 501 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 PCDH10Q9P2E7 1040 aa15.14■□□□□ 0.01
RMDN3-210ENST00000560779 EML1O00423 815 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 LAD1O00515 517 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 P4HBP07237 508 aaKnown RBP15.13■□□□□ 0.01
RMDN3-210ENST00000560779 OR52Z1P0C646 297 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 PDIA4P13667 645 aaKnown RBP15.13■□□□□ 0.01
RMDN3-210ENST00000560779 TOB1P50616 345 aaPredicted RBP15.13■□□□□ 0.01
RMDN3-210ENST00000560779 PSMC5P62195 406 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 UGCGQ16739 394 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 XKR3Q5GH77 459 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
RMDN3-210ENST00000560779 RSPH3Q86UC2 560 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 NEK9Q8TD19 979 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 SCLYQ96I15 445 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 TMEM60Q9H2L4 133 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.13■□□□□ 0.01
RMDN3-210ENST00000560779 PCDHA2Q9Y5H9 948 aa15.13■□□□□ 0.01
RMDN3-210ENST00000560779 GBF1Q92538 1859 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 SMIM35A0A1B0GVV1 85 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 ZBTB42B2RXF5 422 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 SYT1P21579 422 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 THPOP40225 353 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 TXKP42681 527 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 QARSP47897 775 aaKnown RBP15.12■□□□□ 0.01
RMDN3-210ENST00000560779 EPHB4P54760 987 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 IGBP1P78318 339 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 ZNF174Q15697 407 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 FAM26DQ5JW98 314 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 TMEM240Q5SV17 173 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 ZNF618Q5T7W0 954 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 NCAPH2Q6IBW4 605 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 TRAF7Q6Q0C0 670 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 MTHFD1LQ6UB35 978 aa15.12■□□□□ 0.01
RMDN3-210ENST00000560779 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.012e-7■■■■□ 20.1
RMDN3-210ENST00000560779 PTPRSQ13332 1948 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 VPS37CA5D8V6 355 aaPredicted RBP15.11■□□□□ 0.01
RMDN3-210ENST00000560779 RSPH10B2B2RC85 870 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 MAGEB2O15479 319 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 CXCL10P02778 98 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 RSPH10BP0C881 870 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 PRPHP41219 470 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 SHHQ15465 462 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 TMEM266Q2M3C6 531 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 RUFY4Q6ZNE9 571 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 ZNF365Q70YC5 407 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 C16orf59Q7L2K0 433 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 C4orf19Q8IY42 314 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 NME8Q8N427 588 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 C4orf32Q8N8J7 132 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 TRAPPC12Q8WVT3 735 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 NIFKQ9BYG3 293 aaKnown RBP15.11■□□□□ 0.01
RMDN3-210ENST00000560779 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
RMDN3-210ENST00000560779 PPME1Q9Y570 386 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 PCDHB6Q9Y5E3 794 aa15.11■□□□□ 0.01
RMDN3-210ENST00000560779 STBD1O95210 358 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 LYPLA2O95372 231 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 C22orf31O95567 290 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 FGBP02675 491 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
RMDN3-210ENST00000560779 ACTN1P12814 892 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 KLRC1P26715 233 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
RMDN3-210ENST00000560779 PTGDRQ13258 359 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 TARBP2Q15633 366 aaKnown RBP15.1■□□□□ 0.01
RMDN3-210ENST00000560779 C9orf50Q5SZB4 431 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 RASIP1Q5U651 963 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 BANK1Q8NDB2 785 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 HERVK_113Q902F9 699 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 VWCEQ96DN2 955 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 RNPC3Q96LT9 517 aaKnown RBP15.1■□□□□ 0.01
RMDN3-210ENST00000560779 EIF2AK1Q9BQI3 630 aaKnown RBP15.1■□□□□ 0.01
RMDN3-210ENST00000560779 LXNQ9BS40 222 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 ZSWIM4Q9H7M6 989 aa15.1■□□□□ 0.01
RMDN3-210ENST00000560779 STX6O43752 255 aa15.09■□□□□ 0.01
RMDN3-210ENST00000560779 BMP15O95972 392 aa15.09■□□□□ 0.01
RMDN3-210ENST00000560779 ACRP10323 421 aa15.09■□□□□ 0.01
RMDN3-210ENST00000560779 ATP2C1P98194 919 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms