RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 BTBD19C9JJ37 291 aa12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 OSBPP22059 807 aa12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 PBX1P40424 430 aa12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 TBX2Q13207 712 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 PADI6Q6TGC4 694 aa12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 TC2NQ8N9U0 490 aa12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 DNAH12Q6ZR08 3092 aa12.04□□□□□ -0.48
SNRPA1-211ENST00000560433 WDR64B1ANS9 1081 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 BACH1O14867 736 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 CLIC2O15247 247 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 HIP1RO75146 1068 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 RARRES1P49788 294 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 FXR1P51114 621 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 BRI3BPQ8WY22 251 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 GPRASP2Q96D09 838 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 NOC4LQ9BVI4 516 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 ZNF862O60290 1169 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 GYPCP04921 128 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 ERVK-24P63145 666 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 SPAG1Q07617 926 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 LY6KQ17RY6 165 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 MIIPQ5JXC2 388 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 ODR4Q5SWX8 454 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 CCDC60Q8IWA6 550 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 DAW1Q8N136 415 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 JPH1Q9HDC5 661 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 MCM3APO60318 1980 aa12.03□□□□□ -0.48
SNRPA1-211ENST00000560433 TULP1O00294 542 aaPredicted RBP12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 XKR9Q5GH70 373 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 ANO5Q75V66 913 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 C2orf69Q8N8R5 385 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 CCDC150Q8NCX0 1101 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 CCDC43Q96MW1 224 aaKnown RBP12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 PTPN18Q99952 460 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 PARVGQ9HBI0 331 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 SLC9A2Q9UBY0 812 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 FBXO40Q9UH90 709 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 PCDHA10Q9Y5I2 948 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 COL4A3BPQ9Y5P4 624 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 A0A0G2JMZ2 1700 aa12.02□□□□□ -0.48
SNRPA1-211ENST00000560433 PFASO15067 1338 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 SPATA31C2B4DYI2 1134 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 SLC26A4O43511 780 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 ACTR2P61160 394 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 KRT76Q01546 638 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 ADAM9Q13443 819 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 MTF1Q14872 753 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 FAM133AQ8N9E0 248 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 DNERQ8NFT8 737 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 FGD4Q96M96 766 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 MMP19Q99542 508 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 TSG101Q99816 390 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 MYH11P35749 1972 aa12.02□□□□□ -0.49
SNRPA1-211ENST00000560433 EIF3JO75822 258 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 ARIH2O95376 493 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 PSMC5P62195 406 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 LRRC63Q05C16 580 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 TBC1D8BQ0IIM8 1120 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 KCTD2Q14681 263 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 FBXO16Q8IX29 292 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 FAM178BQ8IXR5 827 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 ZNF507Q8TCN5 953 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 PCMTD1Q96MG8 357 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 FIZ1Q96SL8 496 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 LGALS16A8MUM7 142 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 TISP43B9A030 160 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 AKR1B15C9JRZ8 316 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 UBA1P22314 1058 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 NR2F2P24468 414 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 PPP1R2P41236 205 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 JAK3P52333 1124 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 HUNKP57058 714 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 FKBP3Q00688 224 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 MAPK7Q13164 816 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 KNOP1Q1ED39 458 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 E4F1Q66K89 784 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 XRRA1Q6P2D8 792 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 TMEM139Q8IV31 216 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 IWS1Q96ST2 819 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 KIFC3Q9BVG8 833 aa12.01□□□□□ -0.49
SNRPA1-211ENST00000560433 SOWAHDA6NJG2 315 aa12□□□□□ -0.49
SNRPA1-211ENST00000560433 MAFGO15525 162 aa12□□□□□ -0.49
SNRPA1-211ENST00000560433 CASP4P49662 377 aa12□□□□□ -0.49
SNRPA1-211ENST00000560433 APBA1Q02410 837 aa12□□□□□ -0.49
SNRPA1-211ENST00000560433 SYCP1Q15431 976 aa12□□□□□ -0.49
SNRPA1-211ENST00000560433 FAM102BQ5T8I3 360 aa12□□□□□ -0.49
SNRPA1-211ENST00000560433 ZNF746Q6NUN9 644 aaPredicted RBP12□□□□□ -0.49
SNRPA1-211ENST00000560433 EPM2AIP1Q7L775 607 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms