RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 RPAINQ86UA6 219 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 LMBR1Q8WVP7 490 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 ARNTL2Q8WYA1 636 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 MBOAT7Q96N66 472 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 ZNF577Q9BSK1 485 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
SNRPA1-210ENST00000560383 MBLAC1A4D2B0 266 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 AMHP03971 560 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 SLC26A2P50443 739 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 STAT5BP51692 787 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 FAM26DQ5JW98 314 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 KRT25Q7Z3Z0 450 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 DBF4BQ8NFT6 615 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 CERS4Q9HA82 394 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 LMCD1Q9NZU5 365 aa17.2■□□□□ 0.34
SNRPA1-210ENST00000560383 RFXAPO00287 272 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 MSH4O15457 936 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 DTNBO60941 627 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 MARK3P27448 753 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 ERVK-21P61565 698 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 PPFIA1Q13136 1202 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 GRB10Q13322 594 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 NONOQ15233 471 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 AAK1Q2M2I8 961 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 Q4G0T1 1027 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 MARCH8Q5T0T0 291 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 TAF2Q6P1X5 1199 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 TMCO2Q7Z6W1 182 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 MICALL1Q8N3F8 863 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 IL27Q8NEV9 243 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 SEPT8Q92599 483 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 APBB2Q92870 758 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 TGS1Q96RS0 853 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 RIT2Q99578 217 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 INSL6Q9Y581 213 aa17.19■□□□□ 0.34
SNRPA1-210ENST00000560383 LINC01553A4QN01 128 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 RRN3P2A6NIE6 340 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 JAK2O60674 1132 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 LPXNO60711 386 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 RPLP2P05387 115 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 HTRA4P83105 476 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 KRT76Q01546 638 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 PLCB4Q15147 1175 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 GRIK4Q16099 956 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 MIS18BP1Q6P0N0 1132 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 CCDC60Q8IWA6 550 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 SP7Q8TDD2 431 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 SLC5A5Q92911 643 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 COG5Q9UP83 839 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 NCOR1O75376 2440 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 RALGAPA2Q2PPJ7 1873 aa17.18■□□□□ 0.34
SNRPA1-210ENST00000560383 BDP1A6H8Y1 2624 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 DDX39AO00148 427 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 TNFRSF10AO00220 468 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 CTSHP09668 335 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 INSRRP14616 1297 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 INF2Q27J81 1249 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 SPRED2Q7Z698 418 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 MYOCDQ8IZQ8 938 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 ADAMTS19Q8TE59 1207 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 PCDHA10Q9Y5I2 948 aa17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 MAFBQ9Y5Q3 323 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-210ENST00000560383 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 PSMD10O75832 226 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 TDP2O95551 362 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 RABEP1Q15276 862 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 FAM160B1Q5W0V3 765 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 PPP4R3AQ6IN85 833 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 B3GNT9Q6UX72 402 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 ETNPPLQ8TBG4 499 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 ATP8B4Q8TF62 1192 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 UIMC1Q96RL1 719 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 IFIH1Q9BYX4 1025 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 ZNF302Q9NR11 478 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 NLRC5Q86WI3 1866 aa17.16■□□□□ 0.34
SNRPA1-210ENST00000560383 POTEB3A0JP26 581 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 BACH1O14867 736 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 HBP1O60381 514 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 ATP4AP20648 1035 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 SKIV2LQ15477 1246 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 LRCH2Q5VUJ6 765 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 KRT40Q6A162 431 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 POTEBQ6S5H4 581 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 RUFY4Q6ZNE9 571 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 NEK8Q86SG6 692 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms