RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RRN3P2A6NIE6 340 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 CHMP2AO43633 222 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 GAS7O60861 476 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 CAND2O75155 1236 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 XBP1P17861 261 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 KRT76Q01546 638 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 MGAT3Q09327 533 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 UGCGQ16739 394 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 LETM2Q2VYF4 491 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 LRCH2Q5VUJ6 765 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 FAM160B1Q5W0V3 765 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 PIK3AP1Q6ZUJ8 805 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 ETNPPLQ8TBG4 499 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 ATP8B4Q8TF62 1192 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 WASF1Q92558 559 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 TNFRSF25Q93038 417 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 SLC9A7Q96T83 725 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 RIT2Q99578 217 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 GABBR1Q9UBS5 961 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 PCDHA11Q9Y5I1 949 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 PCDHA10Q9Y5I2 948 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 MAFBQ9Y5Q3 323 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 UNC80Q8N2C7 3258 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 ABHD14A-ACY1A0A1B0GW23 586 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 ZNF862O60290 1169 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 PSMD10O75832 226 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 CA3P07451 260 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 PSAPP07602 524 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 GHRP10912 638 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 KLRC1P26715 233 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 KCNJ6P48051 423 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 SLC26A2P50443 739 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 TMEM62Q0P6H9 643 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 IKBKEQ14164 716 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 MTHFD1LQ6UB35 978 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 MOXD1Q6UVY6 613 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 PHOSPHO2Q8TCD6 241 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 TEKT3Q9BXF9 490 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 PRDM12Q9H4Q4 367 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 SLC28A3Q9HAS3 691 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 DISC1Q9NRI5 854 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 CDY2AQ9Y6F7 541 aa13.17□□□□□ -0.3
RABGGTA-216ENST00000560243 IGSF9BQ9UPX0 1349 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 REV3LO60673 3130 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 WDR64B1ANS9 1081 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 HBP1O60381 514 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 KRT2P35908 639 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 MRPS6P82932 125 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 GUCY1B3Q02153 619 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 LPIN1Q14693 890 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 KRT40Q6A162 431 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 FAM117BQ6P1L5 589 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 B3GNT9Q6UX72 402 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 CKAP2LQ8IYA6 745 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 SEPT8Q92599 483 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 TCEAL9Q9UHQ7 104 aa13.16□□□□□ -0.3
RABGGTA-216ENST00000560243 WNT7AO00755 349 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 MMP1P03956 469 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 FOSL2P15408 326 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 ADGRE1Q14246 886 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 ZNF484Q5JVG2 852 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 RSPH3Q86UC2 560 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 DIS3L2Q8IYB7 885 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 KIAA0319LQ8IZA0 1049 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 IFIH1Q9BYX4 1025 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 AGO3Q9H9G7 860 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 CERS4Q9HA82 394 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.3
RABGGTA-216ENST00000560243 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 RFXAPO00287 272 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 EML1O00423 815 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 TLL1O43897 1013 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 GJB5O95377 273 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 C22orf31O95567 290 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 JAK3P52333 1124 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 PRKCEQ02156 737 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 TAP1Q03518 808 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 FBXO47Q5MNV8 452 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 MIER3Q7Z3K6 550 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 MYOCDQ8IZQ8 938 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms