RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SQORQ9Y6N5 450 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 LOXHD1Q8IVV2 1947 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 IGSF9BQ9UPX0 1349 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 CCDC194A0A1B0GVG4 234 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 SMIM35A0A1B0GVV1 85 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 WDR64B1ANS9 1081 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 TBX3O15119 743 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 PSAPP07602 524 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 ATP2A2P16615 1042 aaKnown RBP14.94□□□□□ -0.02
SMAD3-213ENST00000560175 KRT2P35908 639 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 WDR5P61964 334 aaKnown RBP14.94□□□□□ -0.02
SMAD3-213ENST00000560175 ZNF484Q5JVG2 852 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 LRCH2Q5VUJ6 765 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 KRT40Q6A162 431 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 PDXDC2PQ6P474 469 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 DBF4BQ8NFT6 615 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 TIFAQ96CG3 184 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 FAM20AQ96MK3 541 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 UIMC1Q96RL1 719 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 UNC45AQ9H3U1 944 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 ZNF576Q9H609 170 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 DISC1Q9NRI5 854 aa14.94□□□□□ -0.02
SMAD3-213ENST00000560175 YBX2Q9Y2T7 364 aaKnown RBP14.94□□□□□ -0.02
SMAD3-213ENST00000560175 BTBD18B2RXH4 712 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 BACH1O14867 736 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 SLC37A4O43826 429 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 ZNF862O60290 1169 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 GAS7O60861 476 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 JAK3P52333 1124 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 NR5A1Q13285 461 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 IKBKEQ14164 716 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 MTHFD1LQ6UB35 978 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 PIK3AP1Q6ZUJ8 805 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 CCDC83Q8IWF9 413 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 NME8Q8N427 588 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 DNAJB3Q8WWF6 145 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 HAS1Q92839 578 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 TBC1D32Q96NH3 1257 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 CDX2Q99626 313 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-213ENST00000560175 NAP1L4Q99733 375 aaKnown RBP14.93□□□□□ -0.02
SMAD3-213ENST00000560175 TEKT3Q9BXF9 490 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 DDX25Q9UHL0 483 aaKnown RBP14.93□□□□□ -0.02
SMAD3-213ENST00000560175 MSRAQ9UJ68 235 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 TRPC6Q9Y210 931 aa14.93□□□□□ -0.02
SMAD3-213ENST00000560175 KDM3AQ9Y4C1 1321 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 ZBBXA8MT70 800 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 STBD1O95210 358 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 KLRC1P26715 233 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 HMGN5P82970 282 aaKnown RBP14.92□□□□□ -0.02
SMAD3-213ENST00000560175 PPP2R5CQ13362 524 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 LETM2Q2VYF4 491 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 FAM43BQ6ZT52 329 aaPredicted RBP14.92□□□□□ -0.02
SMAD3-213ENST00000560175 RSPH3Q86UC2 560 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 HERC6Q8IVU3 1022 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 TRAPPC12Q8WVT3 735 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 GJA10Q969M2 543 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 GABBR1Q9UBS5 961 aa14.92□□□□□ -0.02
SMAD3-213ENST00000560175 TRANK1O15050 2925 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 FAM205CA6NFA0 338 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 RABGGTBP53611 331 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 IGBP1P78318 339 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 DEFB103AP81534 67 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 MRPS6P82932 125 aaKnown RBP14.91□□□□□ -0.02
SMAD3-213ENST00000560175 GRIN2CQ14957 1233 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 TARBP2Q15633 366 aaKnown RBP14.91□□□□□ -0.02
SMAD3-213ENST00000560175 FBXO47Q5MNV8 452 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 DIS3L2Q8IYB7 885 aaKnown RBP14.91□□□□□ -0.02
SMAD3-213ENST00000560175 KIAA0319LQ8IZA0 1049 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 LINC01465Q8N7H1 131 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 USP38Q8NB14 1042 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 FBXO18Q8NFZ0 1043 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 SEPT8Q92599 483 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 APBB2Q92870 758 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 ZBTB10Q96DT7 871 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 FAM167AQ96KS9 214 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 CEP89Q96ST8 783 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 BRMS1Q9HCU9 246 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 VAV3Q9UKW4 847 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 EYSQ5T1H1 3165 aa14.91□□□□□ -0.02
SMAD3-213ENST00000560175 TTC3P53804 2025 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 CCNT1O60563 726 aaKnown RBP14.9□□□□□ -0.02
SMAD3-213ENST00000560175 GJB5O95377 273 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 C22orf31O95567 290 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 CTSHP09668 335 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 SPIRE1Q08AE8 756 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 LPIN1Q14693 890 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 UGCGQ16739 394 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 IER5Q5VY09 327 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 FAM161BQ96MY7 647 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 NIFKQ9BYG3 293 aaKnown RBP14.9□□□□□ -0.02
SMAD3-213ENST00000560175 NKX2-4Q9H2Z4 354 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
SMAD3-213ENST00000560175 TCEAL9Q9UHQ7 104 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 CEP131Q9UPN4 1083 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 CDY2AQ9Y6F7 541 aa14.9□□□□□ -0.02
SMAD3-213ENST00000560175 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-213ENST00000560175 RBAK-RBAKDNI3L0D1 243 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 EML1O00423 815 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 MAGEB2O15479 319 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 ST18O60284 1047 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms