RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 IGKV6D-21A0A0A0MT36 114 aa13.94□□□□□ -0.18
SPG11-219ENST00000559822 SMIM35A0A1B0GVV1 85 aa13.94□□□□□ -0.18
SPG11-219ENST00000559822 H3BNC9 293 aa13.94□□□□□ -0.18
SPG11-219ENST00000559822 IPO5O00410 1097 aaKnown RBP13.94□□□□□ -0.18
SPG11-219ENST00000559822 HBP1O60381 514 aa13.94□□□□□ -0.18
SPG11-219ENST00000559822 GPM6BQ13491 265 aa13.94□□□□□ -0.18
SPG11-219ENST00000559822 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
SPG11-219ENST00000559822 TMEM192Q8IY95 271 aa13.94□□□□□ -0.18
SPG11-219ENST00000559822 ADGRA3Q8IWK6 1321 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 FAM86B1E9PN63 330 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 DDX39AO00148 427 aaKnown RBP13.93□□□□□ -0.18
SPG11-219ENST00000559822 RB1P06400 928 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 FAM86B2P0C5J1 330 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 PAK2Q13177 524 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 ODR4Q5SWX8 454 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 ZNF746Q6NUN9 644 aaPredicted RBP13.93□□□□□ -0.18
SPG11-219ENST00000559822 ABHD15Q6UXT9 468 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 SMAP1Q8IYB5 467 aaPredicted RBP13.93□□□□□ -0.18
SPG11-219ENST00000559822 ATP8B4Q8TF62 1192 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 CRYGNQ8WXF5 182 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 ZNF577Q9BSK1 485 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 C11orf84Q9BUA3 381 aaPredicted RBP13.93□□□□□ -0.18
SPG11-219ENST00000559822 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
SPG11-219ENST00000559822 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
SPG11-219ENST00000559822 IGSF9BQ9UPX0 1349 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 KDM3AQ9Y4C1 1321 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 IGLV3-22A0A075B6J6 115 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 ENPP3O14638 875 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 CCNE2O96020 404 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 IFNAR1P17181 557 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 CD52P31358 61 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 KRT76Q01546 638 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 PKN1Q16512 942 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 ZNF484Q5JVG2 852 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 PDXDC2PQ6P474 469 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 MTHFD1LQ6UB35 978 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 PHKBQ93100 1093 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 CELF4Q9BZC1 486 aaKnown RBP13.92□□□□□ -0.18
SPG11-219ENST00000559822 LMAN2LQ9H0V9 348 aa13.92□□□□□ -0.18
SPG11-219ENST00000559822 UBE2ZQ9H832 354 aaPredicted RBP13.92□□□□□ -0.18
SPG11-219ENST00000559822 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
SPG11-219ENST00000559822 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 C5orf67F2Z3F1 127 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 DHX15O43143 795 aaKnown RBP13.91□□□□□ -0.18
SPG11-219ENST00000559822 NEFLP07196 543 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 PSAPP07602 524 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 STAG3L1P0CL83 205 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 KLRC1P26715 233 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 CIITAP33076 1130 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 CTNNB1P35222 781 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 EVCP57679 992 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 BTG3Q14201 252 aaPredicted RBP13.91□□□□□ -0.18
SPG11-219ENST00000559822 NTRK3Q16288 839 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 CPLX2Q6PUV4 134 aaKnown RBP13.91□□□□□ -0.18
SPG11-219ENST00000559822 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 CCDC60Q8IWA6 550 aaPredicted RBP13.91□□□□□ -0.18
SPG11-219ENST00000559822 CKAP2LQ8IYA6 745 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 BANK1Q8NDB2 785 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
SPG11-219ENST00000559822 SLC26A6Q9BXS9 759 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 C22orf23Q9BZE7 217 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 AGO3Q9H9G7 860 aaKnown RBP13.91□□□□□ -0.18
SPG11-219ENST00000559822 SH3GLB2Q9NR46 395 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 CEP131Q9UPN4 1083 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 PCDHA10Q9Y5I2 948 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 CYP46A1Q9Y6A2 500 aa13.91□□□□□ -0.18
SPG11-219ENST00000559822 TTC3P53804 2025 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.9□□□□□ -0.18
SPG11-219ENST00000559822 CPLX1O14810 134 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 NCK2O43639 380 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 PDIA3P30101 505 aaKnown RBP13.9□□□□□ -0.18
SPG11-219ENST00000559822 PUS10Q3MIT2 529 aaKnown RBP13.9□□□□□ -0.18
SPG11-219ENST00000559822 LEXMQ3ZCV2 418 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 PRR16Q569H4 304 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 SWSAP1Q6NVH7 229 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 NPAS4Q8IUM7 802 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 CLP1Q92989 425 aaKnown RBP13.9□□□□□ -0.18
SPG11-219ENST00000559822 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 FAM167AQ96KS9 214 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
SPG11-219ENST00000559822 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 C1QTNF1Q9BXJ1 281 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
SPG11-219ENST00000559822 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
SPG11-219ENST00000559822 ZSWIM6Q9HCJ5 1215 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 BDP1A6H8Y1 2624 aa13.9□□□□□ -0.18
SPG11-219ENST00000559822 WDR64B1ANS9 1081 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 DGKIO75912 1065 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 KCNA5P22460 613 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 BMPR1AP36894 532 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 USP11P51784 963 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 NLRP5P59047 1200 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
SPG11-219ENST00000559822 SSRP1Q08945 709 aaKnown RBP13.89□□□□□ -0.19
SPG11-219ENST00000559822 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms