RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZNF571Q7Z3V5 609 aaPredicted RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 WDR18Q9BV38 432 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 NUCKS1Q9H1E3 243 aaKnown RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 GOLPH3Q9H4A6 298 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 ARMCX3Q9UH62 379 aaPredicted RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 BRWD3Q6RI45 1802 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 ASTN1O14525 1302 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 ACTN2P35609 894 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 PAFAH1B1P43034 410 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 MMP14P50281 582 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 PTK2Q05397 1052 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 KCTD19Q17RG1 926 aaPredicted RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 KIAA0753Q2KHM9 967 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 CCDC174Q6PII3 467 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 KSR1Q8IVT5 923 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 RNF10Q8N5U6 811 aaKnown RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 ACER1Q8TDN7 264 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 CSRNP1Q96S65 589 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 AIPL1Q9NZN9 384 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 TRAF3IP3Q9Y228 551 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 ZSCAN5CA6NGD5 496 aaPredicted RBP11.02□□□□□ -0.64
LRRC28-216ENST00000559819 TBX3O15119 743 aa11.02□□□□□ -0.64
LRRC28-216ENST00000559819 CFBP00751 764 aa11.02□□□□□ -0.64
LRRC28-216ENST00000559819 AFPP02771 609 aaKnown RBP11.02□□□□□ -0.64
LRRC28-216ENST00000559819 NR3C1P04150 777 aa11.02□□□□□ -0.64
LRRC28-216ENST00000559819 IRF2BP2Q7Z5L9 587 aa11.02□□□□□ -0.64
LRRC28-216ENST00000559819 TSEN2Q8NCE0 465 aaKnown RBP11.02□□□□□ -0.64
LRRC28-216ENST00000559819 GOLGA5Q8TBA6 731 aa11.02□□□□□ -0.64
LRRC28-216ENST00000559819 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.64
LRRC28-216ENST00000559819 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.64
LRRC28-216ENST00000559819 ESYT3A0FGR9 886 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 GRID2IPA4D2P6 1211 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 TCP10L2B9ZVM9 353 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 SLC26A4O43511 780 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 CALUO43852 315 aaPredicted RBP11.02□□□□□ -0.65
LRRC28-216ENST00000559819 UCHL3P15374 230 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 PON1P27169 355 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 NMT1P30419 496 aaKnown RBP11.02□□□□□ -0.65
LRRC28-216ENST00000559819 ITIH3Q06033 890 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 ZC2HC1CQ53FD0 456 aaPredicted RBP11.02□□□□□ -0.65
LRRC28-216ENST00000559819 C8orf74Q6P047 294 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 FRMD5Q7Z6J6 570 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 DYDC2Q96IM9 177 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 FAM20AQ96MK3 541 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 MRIQ9BWK5 157 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 STIM2Q9P246 746 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 RABGAP1Q9Y3P9 1069 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 PCDHB13Q9Y5F0 798 aa11.02□□□□□ -0.65
LRRC28-216ENST00000559819 IGLV3-22A0A075B6J6 115 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 TBCAO75347 108 aaKnown RBP11.01□□□□□ -0.65
LRRC28-216ENST00000559819 APBA3O96018 575 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
LRRC28-216ENST00000559819 CIITAP33076 1130 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 COG2Q14746 738 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 EPHA7Q15375 998 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 ZYXQ15942 572 aaKnown RBP11.01□□□□□ -0.65
LRRC28-216ENST00000559819 EXOC3L4Q17RC7 722 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 MUM1L1Q5H9M0 696 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 RINT1Q6NUQ1 792 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 ARHGAP27Q6ZUM4 889 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 TPH2Q8IWU9 490 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 SMCHD1A6NHR9 2005 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 GOLGA6BA6NDN3 693 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 PDXKO00764 312 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 EYA4O95677 639 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 GLI1P08151 1106 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 XRCC5P13010 732 aaKnown RBP11.01□□□□□ -0.65
LRRC28-216ENST00000559819 HDLBPQ00341 1268 aaKnown RBP11.01□□□□□ -0.65
LRRC28-216ENST00000559819 CFAP221Q4G0U5 840 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.01□□□□□ -0.65
LRRC28-216ENST00000559819 SIX2Q9NPC8 291 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
LRRC28-216ENST00000559819 ZMYM2Q9UBW7 1377 aa11.01□□□□□ -0.65
LRRC28-216ENST00000559819 YDJCA8MPS7 323 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 TGFB1I1O43294 461 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 FKBP1AP62942 108 aaKnown RBP11□□□□□ -0.65
LRRC28-216ENST00000559819 BTNL9Q6UXG8 535 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 CDAN1Q8IWY9 1227 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 KRT12Q99456 494 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 POLR3CQ9BUI4 534 aaPredicted RBP11□□□□□ -0.65
LRRC28-216ENST00000559819 LCMT1Q9UIC8 334 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 SLX4Q8IY92 1834 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 H0YIN7 160 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 SLITRK3O94933 977 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 CARSP49589 748 aaKnown RBP11□□□□□ -0.65
LRRC28-216ENST00000559819 TRADDQ15628 312 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 LRRC31Q6UY01 552 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 MYCT1Q8N699 235 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 PROCA1Q8NCQ7 364 aaPredicted RBP11□□□□□ -0.65
LRRC28-216ENST00000559819 SLC35C1Q96A29 364 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 LUC7LQ9NQ29 371 aaKnown RBP11□□□□□ -0.65
LRRC28-216ENST00000559819 GCNT4Q9P109 453 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 WRAP73Q9P2S5 460 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms