RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 GNAQP50148 359 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 GATMP50440 423 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 ADGRD2Q7Z7M1 963 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 CRYGNQ8WXF5 182 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 P2RX5Q93086 422 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 MXRA8Q9BRK3 442 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 C11orf84Q9BUA3 381 aaPredicted RBP12.71□□□□□ -0.37
HERC1-204ENST00000559715 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.37
HERC1-204ENST00000559715 CLEC1BQ9P126 229 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 PADI3Q9ULW8 664 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 PCDHA2Q9Y5H9 948 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 SPTBN4Q9H254 2564 aa12.71□□□□□ -0.38
HERC1-204ENST00000559715 NFASCO94856 1347 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 RRN3P2A6NIE6 340 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 MEIS1O00470 390 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 DHX15O43143 795 aaKnown RBP12.7□□□□□ -0.38
HERC1-204ENST00000559715 NCK2O43639 380 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 MGEA5O60502 916 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 EYA4O95677 639 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 ATP4AP20648 1035 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 CLK2P49760 499 aaKnown RBP12.7□□□□□ -0.38
HERC1-204ENST00000559715 ACTR2P61160 394 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 IGBP1P78318 339 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 EXOSC10Q01780 885 aaKnown RBP12.7□□□□□ -0.38
HERC1-204ENST00000559715 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
HERC1-204ENST00000559715 CREB3L3Q68CJ9 461 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 PLPPR4Q7Z2D5 763 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 GLG1Q92896 1179 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 FAM49AQ9H0Q0 323 aaPredicted RBP12.7□□□□□ -0.38
HERC1-204ENST00000559715 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
HERC1-204ENST00000559715 SLC9A2Q9UBY0 812 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 SEC63Q9UGP8 760 aaKnown RBP12.7□□□□□ -0.38
HERC1-204ENST00000559715 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
HERC1-204ENST00000559715 FRYLO94915 3013 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 GLP2RO95838 553 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 CLUL1Q15846 466 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 APOA5Q6Q788 366 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 CASC1Q6TDU7 716 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 HFE2Q6ZVN8 426 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
HERC1-204ENST00000559715 KLHL23Q8NBE8 558 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 TMEM40Q8WWA1 233 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 PGBD1Q96JS3 809 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 CELF4Q9BZC1 486 aaKnown RBP12.69□□□□□ -0.38
HERC1-204ENST00000559715 AGO4Q9HCK5 861 aaKnown RBP12.69□□□□□ -0.38
HERC1-204ENST00000559715 RIC8AQ9NPQ8 531 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 RWDD3Q9Y3V2 267 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 PCDHGC5Q9Y5F6 944 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 MYO10Q9HD67 2058 aa12.69□□□□□ -0.38
HERC1-204ENST00000559715 KMT2EQ8IZD2 1858 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 IGLV3-22A0A075B6J6 115 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 SMIM35A0A1B0GVV1 85 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 EDIL3O43854 480 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 CALM1P0DP23 149 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 CALM2P0DP24 149 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 CALM3P0DP25 149 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
HERC1-204ENST00000559715 CEP55Q53EZ4 464 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 HERC4Q5GLZ8 1057 aaPredicted RBP12.68□□□□□ -0.38
HERC1-204ENST00000559715 IER5Q5VY09 327 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 MTHFD1LQ6UB35 978 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 ABHD15Q6UXT9 468 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 RSPH3Q86UC2 560 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 FTHL17Q9BXU8 183 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 ERVK-5Q9HDB9 667 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 TRPV2Q9Y5S1 764 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
HERC1-204ENST00000559715 FAM86B1E9PN63 330 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 STXBP3O00186 592 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 FAM86B2P0C5J1 330 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 SREBF1P36956 1147 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 STAT5BP51692 787 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
HERC1-204ENST00000559715 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
HERC1-204ENST00000559715 KCNC3Q14003 757 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 TMEM266Q2M3C6 531 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 NAALADL2Q58DX5 795 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 NFXL1Q6ZNB6 911 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 MICU3Q86XE3 530 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 RNF135Q8IUD6 432 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
HERC1-204ENST00000559715 EFHBQ8N7U6 833 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms