RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 JUNBP17275 347 aaPredicted RBP7.58□□□□□ -1.2
CRNDE-207ENST00000559598 CCT4P50991 539 aaKnown RBP7.58□□□□□ -1.2
CRNDE-207ENST00000559598 TNFAIP1Q13829 316 aa7.58□□□□□ -1.2
CRNDE-207ENST00000559598 DLGAP5Q15398 846 aa7.58□□□□□ -1.2
CRNDE-207ENST00000559598 TTLL5Q6EMB2 1281 aa7.58□□□□□ -1.2
CRNDE-207ENST00000559598 ZSWIM5Q9P217 1185 aa7.58□□□□□ -1.2
CRNDE-207ENST00000559598 UNC80Q8N2C7 3258 aa7.58□□□□□ -1.2
CRNDE-207ENST00000559598 A0A1B0GUL6 1792 aa7.58□□□□□ -1.2
CRNDE-207ENST00000559598 MGAMO43451 1857 aa7.58□□□□□ -1.2
CRNDE-207ENST00000559598 GTF2A2P52657 109 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 RIPK4P57078 832 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 RNF4P78317 190 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 ZP2Q05996 745 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 ZNF792Q3KQV3 632 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 CCDC81Q6ZN84 652 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 TAB3Q8N5C8 712 aaPredicted RBP7.57□□□□□ -1.2
CRNDE-207ENST00000559598 OPTNQ96CV9 577 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 SLC9A7Q96T83 725 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 TM9SF2Q99805 663 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 PTPN18Q99952 460 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 GPR62Q9BZJ7 368 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 DUSP15Q9H1R2 295 aaPredicted RBP7.57□□□□□ -1.2
CRNDE-207ENST00000559598 TRIT1Q9H3H1 467 aaKnown RBP7.57□□□□□ -1.2
CRNDE-207ENST00000559598 CWC25Q9NXE8 425 aaPredicted RBP7.57□□□□□ -1.2
CRNDE-207ENST00000559598 MINPP1Q9UNW1 487 aa7.57□□□□□ -1.2
CRNDE-207ENST00000559598 CCL15-CCL14A0A0B4J2E2 113 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 TLR2O60603 784 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 CLEC3AO75596 197 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 GJB1P08034 283 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 ACRP10323 421 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 SRFP11831 508 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 CTSWP56202 376 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 FKBP1AP62942 108 aaKnown RBP7.56□□□□□ -1.2
CRNDE-207ENST00000559598 LACTBP83111 547 aaPredicted RBP7.56□□□□□ -1.2
CRNDE-207ENST00000559598 CAP1Q01518 475 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 CCL15Q16663 113 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 NBPF12Q5TAG4 269 aaPredicted RBP7.56□□□□□ -1.2
CRNDE-207ENST00000559598 SLC23A3Q6PIS1 610 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 UBE2Q1Q7Z7E8 422 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 LSRQ86X29 649 aaPredicted RBP7.56□□□□□ -1.2
CRNDE-207ENST00000559598 TMEM192Q8IY95 271 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 PI4K2BQ8TCG2 481 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 SH3TC2Q8TF17 1288 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 MXD3Q9BW11 206 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 CHMP4AQ9BY43 222 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 ANKRD2Q9GZV1 360 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 GPATCH2Q9NW75 528 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 LMCD1Q9NZU5 365 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 ALPK3Q96L96 1907 aa7.56□□□□□ -1.2
CRNDE-207ENST00000559598 WASH4PA8MWX3 477 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 CHL1O00533 1208 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 USP2O75604 605 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-207ENST00000559598 DDX58O95786 925 aaKnown RBP7.55□□□□□ -1.2
CRNDE-207ENST00000559598 HOXD10P28358 340 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 IGHMBP2P38935 993 aaKnown RBP7.55□□□□□ -1.2
CRNDE-207ENST00000559598 NASPP49321 788 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-207ENST00000559598 UBXN2AP68543 259 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 BRI3BPQ8WY22 251 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 SEC16BQ96JE7 1060 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 SLC6A18Q96N87 628 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 CRBNQ96SW2 442 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 CARS2Q9HA77 564 aaKnown RBP7.55□□□□□ -1.2
CRNDE-207ENST00000559598 IGSF5Q9NSI5 407 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 MBNL3Q9NUK0 354 aaKnown RBP7.55□□□□□ -1.2
CRNDE-207ENST00000559598 ADAMTS6Q9UKP5 1117 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 FZD1Q9UP38 647 aa7.55□□□□□ -1.2
CRNDE-207ENST00000559598 CACNA1FO60840 1977 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
CRNDE-207ENST00000559598 CETPP11597 493 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 ITGB5P18084 799 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 GUCY2CP25092 1073 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 TPP2P29144 1249 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-207ENST00000559598 TMPOP42166 694 aaKnown RBP7.54□□□□□ -1.2
CRNDE-207ENST00000559598 KCNJ4P48050 445 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 RASA3Q14644 834 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 CFAP100Q494V2 611 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 RUFY4Q6ZNE9 571 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 TMPRSS7Q7RTY8 843 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 RAET1EQ8TD07 263 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 MYD88Q99836 296 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 SRRTQ9BXP5 876 aaKnown RBP7.54□□□□□ -1.2
CRNDE-207ENST00000559598 VEZTQ9HBM0 779 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 PRDM7Q9NQW5 492 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 SRRDQ9UH36 339 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 STXBP5LQ9Y2K9 1186 aa7.54□□□□□ -1.2
CRNDE-207ENST00000559598 VCANP13611 3396 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 CLRN2A0PK11 232 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 FAM86C2PA6NEL3 165 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 WTIPA6NIX2 430 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-207ENST00000559598 FARP2O94887 1054 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-207ENST00000559598 GIPRP48546 466 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 SNAPC2Q13487 334 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 VGLL4Q14135 290 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 KRT24Q2M2I5 525 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 GAB4Q2WGN9 574 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 C15orf52Q6ZUT6 534 aaKnown RBP7.53□□□□□ -1.2
CRNDE-207ENST00000559598 TSPYL5Q86VY4 417 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-207ENST00000559598 FAM43AQ8N2R8 423 aa7.53□□□□□ -1.2
CRNDE-207ENST00000559598 TTLL11Q8NHH1 800 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms