RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TMCO2Q7Z6W1 182 aaPredicted RBP9.26□□□□□ -0.93
SNX1-207ENST00000559401 HERC6Q8IVU3 1022 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 CCDC83Q8IWF9 413 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 MYOCDQ8IZQ8 938 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 DBF4BQ8NFT6 615 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 ATP8B4Q8TF62 1192 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 GJA10Q969M2 543 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 LENG9Q96B70 501 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 GAS2L1Q99501 681 aaPredicted RBP9.26□□□□□ -0.93
SNX1-207ENST00000559401 PRDM12Q9H4Q4 367 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 DDX25Q9UHL0 483 aaKnown RBP9.26□□□□□ -0.93
SNX1-207ENST00000559401 PCDHA10Q9Y5I2 948 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 LOXHD1Q8IVV2 1947 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 IGKV6D-21A0A0A0MT36 114 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 MBLAC1A4D2B0 266 aaPredicted RBP9.25□□□□□ -0.93
SNX1-207ENST00000559401 M0R2N6 131 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 CCNT1O60563 726 aaKnown RBP9.25□□□□□ -0.93
SNX1-207ENST00000559401 AMHP03971 560 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 RPLP2P05387 115 aaKnown RBP9.25□□□□□ -0.93
SNX1-207ENST00000559401 FDPSP14324 419 aaKnown RBP9.25□□□□□ -0.93
SNX1-207ENST00000559401 JAK3P52333 1124 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 MRPS6P82932 125 aaKnown RBP9.25□□□□□ -0.93
SNX1-207ENST00000559401 MARCH8Q5T0T0 291 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 MIER3Q7Z3K6 550 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 NEK8Q86SG6 692 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 PHOSPHO2Q8TCD6 241 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 SLC5A5Q92911 643 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 FAM167AQ96KS9 214 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 ZSCAN31Q96LW9 406 aaPredicted RBP9.25□□□□□ -0.93
SNX1-207ENST00000559401 RIT2Q99578 217 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 IFIH1Q9BYX4 1025 aaKnown RBP9.25□□□□□ -0.93
SNX1-207ENST00000559401 UNC45AQ9H3U1 944 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 CERS4Q9HA82 394 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 DISC1Q9NRI5 854 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 GINS2Q9Y248 185 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 CDY2AQ9Y6F7 541 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 EVPLQ92817 2033 aa9.25□□□□□ -0.93
SNX1-207ENST00000559401 COL1A2P08123 1366 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 FAM205CA6NFA0 338 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 SLC37A4O43826 429 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 UPP2O95045 317 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 CHRNA1P02708 482 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 MMP1P03956 469 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 GCFC2P16383 781 aaKnown RBP9.24□□□□□ -0.93
SNX1-207ENST00000559401 IGFBP4P22692 258 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 KLRC1P26715 233 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 SFNP31947 248 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 GUCY1B3Q02153 619 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 PRKCEQ02156 737 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 NR5A1Q13285 461 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 SAFBQ15424 915 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNX1-207ENST00000559401 Q4G0T1 1027 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 PLEKHG4Q58EX7 1191 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 ZNF484Q5JVG2 852 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 FAM26DQ5JW98 314 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 IER5Q5VY09 327 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 KRT40Q6A162 431 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 MTHFD1LQ6UB35 978 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 MOXD1Q6UVY6 613 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNX1-207ENST00000559401 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
SNX1-207ENST00000559401 METTL13Q8N6R0 699 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 FAM184AQ8NB25 1140 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 MAFAQ8NHW3 353 aaPredicted RBP9.24□□□□□ -0.93
SNX1-207ENST00000559401 BBXQ8WY36 941 aaPredicted RBP9.24□□□□□ -0.93
SNX1-207ENST00000559401 PPM1EQ8WY54 764 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 APBB2Q92870 758 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 PPP1R16BQ96T49 567 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 NAP1L4Q99733 375 aaKnown RBP9.24□□□□□ -0.93
SNX1-207ENST00000559401 OSBPL7Q9BZF2 842 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 PCDHA2Q9Y5H9 948 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 TRPV2Q9Y5S1 764 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 IGSF9BQ9UPX0 1349 aa9.24□□□□□ -0.93
SNX1-207ENST00000559401 LAMA3Q16787 3333 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 COL4A4P53420 1690 aaPredicted RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 SZT2Q5T011 3432 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 CYP3A7-CYP3A51PA0A087WV96 503 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 SMIM35A0A1B0GVV1 85 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 EDIL3O43854 480 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 ST18O60284 1047 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 PSMD10O75832 226 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 BAG4O95429 457 aaKnown RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 OATP04181 439 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 ATP4AP20648 1035 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 IBSPP21815 317 aaPredicted RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 CYP3A7P24462 503 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 RBM25P49756 843 aaKnown RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 MGAT3Q09327 533 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 ST3GAL1Q11201 340 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 GNL2Q13823 731 aaKnown RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 LPIN1Q14693 890 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 RABEP1Q15276 862 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 UGCGQ16739 394 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 TSHZ1Q6ZSZ6 1077 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 RPAINQ86UA6 219 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 MICALL1Q8N3F8 863 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 SLC17A8Q8NDX2 589 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 ARNTL2Q8WYA1 636 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 C8orf76Q96K31 380 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms