RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 KLHL7Q8IXQ5 586 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 TAF4BQ92750 862 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 NAGPAQ9UK23 515 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 NENFQ9UMX5 172 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 KLRG2A4D1S0 409 aaPredicted RBP18.16■□□□□ 0.5
SPG11-215ENST00000559193 RPA1P27694 616 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 EPHA7Q15375 998 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 SLFN13Q68D06 897 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 PACS2Q86VP3 889 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 EFCAB13Q8IY85 973 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 WHAMMQ8TF30 809 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 CCDC17Q96LX7 622 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 SIX2Q9NPC8 291 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 DNM3Q9UQ16 869 aa18.16■□□□□ 0.5
SPG11-215ENST00000559193 ASTN1O14525 1302 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 VGLL3A8MV65 326 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 RSPH10B2B2RC85 870 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 RSPH10BP0C881 870 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
SPG11-215ENST00000559193 PRKCIP41743 596 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 SNAP25P60880 206 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 DOK7Q18PE1 504 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 Q4G0T1 1027 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 DCAF17Q5H9S7 520 aaPredicted RBP18.15■□□□□ 0.5
SPG11-215ENST00000559193 CD302Q8IX05 232 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 ERMNQ8TAM6 284 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 PPM1EQ8WY54 764 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 BZW2Q9Y6E2 419 aaKnown RBP18.15■□□□□ 0.5
SPG11-215ENST00000559193 SIPA1L1O43166 1804 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 FAM86B1E9PN63 330 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 POLRMTO00411 1230 aaKnown RBP18.15■□□□□ 0.5
SPG11-215ENST00000559193 PDXKO00764 312 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 FAM86B2P0C5J1 330 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
SPG11-215ENST00000559193 ATP1A2P50993 1020 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 ERVK-9P63128 1117 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 ALKBH5Q6P6C2 394 aaKnown RBP18.15■□□□□ 0.5
SPG11-215ENST00000559193 HHIPL2Q6UWX4 724 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 MKL1Q969V6 931 aa18.15■□□□□ 0.5
SPG11-215ENST00000559193 SHTN1A0MZ66 631 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 EBAG9O00559 213 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 TBX3O15119 743 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 ECHS1P30084 290 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 CASP4P49662 377 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 PTPROQ16827 1216 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 BMT2Q1RMZ1 405 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 KDM7AQ6ZMT4 941 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 TEKT1Q969V4 418 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 USP21Q9UK80 565 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 CALUO43852 315 aaPredicted RBP18.14■□□□□ 0.49
SPG11-215ENST00000559193 NR3C1P04150 777 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 HSPA9P38646 679 aaKnown RBP18.14■□□□□ 0.49
SPG11-215ENST00000559193 NOP2P46087 812 aaKnown RBP18.14■□□□□ 0.49
SPG11-215ENST00000559193 JAM2P57087 298 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 RUSC1Q9BVN2 902 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 TAF1DQ9H5J8 278 aaPredicted RBP18.14■□□□□ 0.49
SPG11-215ENST00000559193 POLD4Q9HCU8 107 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 TYW1Q9NV66 732 aaKnown RBP18.14■□□□□ 0.49
SPG11-215ENST00000559193 NYAP2Q9P242 653 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 FAM169AQ9Y6X4 670 aa18.14■□□□□ 0.49
SPG11-215ENST00000559193 TAL1P17542 331 aaPredicted RBP18.13■□□□□ 0.49
SPG11-215ENST00000559193 TTC31Q49AM3 519 aaPredicted RBP18.13■□□□□ 0.49
SPG11-215ENST00000559193 SIAH1Q8IUQ4 282 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 TPCN2Q8NHX9 752 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 ACTRT1Q8TDG2 376 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 SLC35C1Q96A29 364 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 PBKQ96KB5 322 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 RNPC3Q96LT9 517 aaKnown RBP18.13■□□□□ 0.49
SPG11-215ENST00000559193 ZC3H12CQ9C0D7 883 aaKnown RBP18.13■□□□□ 0.49
SPG11-215ENST00000559193 CEP104O60308 925 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 CACNB3P54284 484 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 CYP4A11Q02928 519 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 IFI16Q16666 785 aaKnown RBP18.13■□□□□ 0.49
SPG11-215ENST00000559193 TCERG1LQ5VWI1 586 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 TADA2BQ86TJ2 420 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 FAM107BQ9H098 131 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 ISCUQ9H1K1 167 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 VAV3Q9UKW4 847 aa18.13■□□□□ 0.49
SPG11-215ENST00000559193 A0A087WUV0 522 aaPredicted RBP18.12■□□□□ 0.49
SPG11-215ENST00000559193 A6NNZ2 444 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 SLC16A3O15427 465 aaKnown RBP18.12■□□□□ 0.49
SPG11-215ENST00000559193 FLOT1O75955 427 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 CPP00450 1065 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 SREBF1P36956 1147 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 KCNA1Q09470 495 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 TUBB8Q3ZCM7 444 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 GJB7Q6PEY0 223 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 AMNQ9BXJ7 453 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 BHMT2Q9H2M3 363 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 FBXL5Q9UKA1 691 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 PCDHAC2Q9Y5I4 1007 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 DDTLA6NHG4 134 aaPredicted RBP18.12■□□□□ 0.49
SPG11-215ENST00000559193 BHMG1C9JSJ3 638 aaPredicted RBP18.12■□□□□ 0.49
SPG11-215ENST00000559193 TCP10Q12799 353 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 USH1GQ495M9 461 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 EMC10Q5UCC4 262 aa18.12■□□□□ 0.49
SPG11-215ENST00000559193 METTL13Q8N6R0 699 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms