RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PLA2G4FQ68DD2 849 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 NFRKBQ6P4R8 1299 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 POTEGQ6S5H5 508 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 RUFY4Q6ZNE9 571 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 ANO5Q75V66 913 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 CATSPER3Q86XQ3 398 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 C7orf61Q8IZ16 206 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 RDM1Q8NG50 284 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 ATP8B4Q8TF62 1192 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 VTI1AQ96AJ9 217 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
TPM1-217ENST00000559108 PNMA5Q96PV4 448 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 SMARCAD1Q9H4L7 1026 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 PDLIM7Q9NR12 457 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 ERAP1Q9NZ08 941 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 TBX21Q9UL17 535 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 LAD1O00515 517 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 MARCH6O60337 910 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 BAG4O95429 457 aaKnown RBP12.24□□□□□ -0.45
TPM1-217ENST00000559108 CAPN2P17655 700 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 TARBP2Q15633 366 aaKnown RBP12.24□□□□□ -0.45
TPM1-217ENST00000559108 TRIM71Q2Q1W2 868 aaKnown RBP12.24□□□□□ -0.45
TPM1-217ENST00000559108 AXDND1Q5T1B0 1012 aaPredicted RBP12.24□□□□□ -0.45
TPM1-217ENST00000559108 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 TET1Q8NFU7 2136 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 VWCEQ96DN2 955 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
TPM1-217ENST00000559108 CSRNP2Q9H175 543 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 GDPD2Q9HCC8 539 aa12.24□□□□□ -0.45
TPM1-217ENST00000559108 PDE4DIPQ5VU43 2346 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 A0A087X0B3 334 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 OATP04181 439 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 QARSP47897 775 aaKnown RBP12.23□□□□□ -0.45
TPM1-217ENST00000559108 NPEPPSP55786 919 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 PSMC5P62195 406 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 IGBP1P78318 339 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 PPFIA1Q13136 1202 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 GRB10Q13322 594 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
TPM1-217ENST00000559108 DRP2Q13474 957 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 GRIK4Q16099 956 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 FAM160B1Q5W0V3 765 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 ARL6IP4Q66PJ3 421 aaKnown RBP12.23□□□□□ -0.45
TPM1-217ENST00000559108 DTHD1Q6ZMT9 781 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 KATNAL1Q9BW62 490 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 AZI2Q9H6S1 392 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 LRWD1Q9UFC0 647 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 ZNF215Q9UL58 517 aaPredicted RBP12.23□□□□□ -0.45
TPM1-217ENST00000559108 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 MORC2Q9Y6X9 1032 aaPredicted RBP12.23□□□□□ -0.45
TPM1-217ENST00000559108 PTPRSQ13332 1948 aa12.23□□□□□ -0.45
TPM1-217ENST00000559108 MBLAC1A4D2B0 266 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 LYPLA2O95372 231 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 C22orf31O95567 290 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 P4HBP07237 508 aaKnown RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 SYN1P17600 705 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 GPNMBQ14956 572 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 PTGISQ16647 500 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 SHC4Q6S5L8 630 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 LINC01465Q8N7H1 131 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 C7orf31Q8N865 590 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 PIGOQ8TEQ8 1089 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 EPSTI1Q96J88 318 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 TOX2Q96NM4 488 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 PLIN2Q99541 437 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 WNT8AQ9H1J5 351 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 RCOR1Q9UKL0 485 aa12.22□□□□□ -0.45
TPM1-217ENST00000559108 ZMYND8Q9ULU4 1186 aaPredicted RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 SRPRBQ9Y5M8 271 aaKnown RBP12.22□□□□□ -0.45
TPM1-217ENST00000559108 C17orf102A2RUQ5 167 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 E9PMD0 336 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 SPTLC2O15270 562 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 YEATS4O95619 227 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 CLTBP09497 229 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 RPA1P27694 616 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 YWHABP31946 246 aaKnown RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 CCT6AP40227 531 aaKnown RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 SLC26A2P50443 739 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 NUCB2P80303 420 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 PDIA5Q14554 519 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 KARSQ15046 597 aaKnown RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 STK38Q15208 465 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 TMEM266Q2M3C6 531 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 MTERF2Q49AM1 385 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 C4orf19Q8IY42 314 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms