RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 PYM1Q9BRP8 204 aaKnown RBP7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 CCSER1Q9C0I3 900 aa7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 TUT1Q9H6E5 874 aaKnown RBP7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 NRBP2Q9NSY0 501 aa7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 DDX19AQ9NUU7 478 aaKnown RBP7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 SEPT9Q9UHD8 586 aaPredicted RBP7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 KIAA1024Q9UPX6 916 aa7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
CHRNA3-204ENST00000559002 A0A1B0GVL5 298 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 A0A1W2PQ45 241 aaPredicted RBP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 A0A1W2PQY0 241 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 HBP1O60381 514 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 GADD45BO75293 160 aaPredicted RBP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 SLITRK3O94933 977 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 LYPLA2O95372 231 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 SSBP05455 408 aaKnown RBP eCLIP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 SPATA31C1P0DKV0 1188 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PFKFB1P16118 471 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PLCG1P19174 1290 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PTMSP20962 102 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 YWHABP31946 246 aaKnown RBP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 STAT6P42226 847 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 SYKP43405 635 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PPFIA1Q13136 1202 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 GRB10Q13322 594 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PLCB4Q15147 1175 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 KIAA0753Q2KHM9 967 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 TMEM119Q4V9L6 283 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 FAM47CQ5HY64 1035 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 HYIQ5T013 277 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 COL13A1Q5TAT6 717 aaPredicted RBP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 CCSAPQ6IQ19 270 aaPredicted RBP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 USP49Q70CQ1 688 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 OTUD6AQ7L8S5 288 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 C4orf19Q8IY42 314 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 C7orf31Q8N865 590 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 ANKLE1Q8NAG6 615 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 ATP8B4Q8TF62 1192 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 BBXQ8WY36 941 aaPredicted RBP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 CCDC34Q96HJ3 373 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 C16orf70Q9BSU1 422 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 MMTAG2Q9BU76 263 aaKnown RBP7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PANK2Q9BZ23 570 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 CRISPLD2Q9H0B8 497 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 STARD7Q9NQZ5 370 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 STK17AQ9UEE5 414 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 KCNH3Q9ULD8 1083 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 PHF24Q9UPV7 400 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 DNM3Q9UQ16 869 aa7.37□□□□□ -1.23
CHRNA3-204ENST00000559002 A0A0U1RQG5 324 aaPredicted RBP7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 C17orf102A2RUQ5 167 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 ARHGEF35A5YM69 484 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 E9PMD0 336 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 POLR2DO15514 142 aaKnown RBP7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 ZNF862O60290 1169 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 SMIM10L2AP0DMW4 78 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 SMIM10L2BP0DMW5 78 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 XRCC6P12956 609 aaKnown RBP eCLIP7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 MCM4P33991 863 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 NDUFA8P51970 172 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 PSMC6P62333 389 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 IGBP1P78318 339 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 FAM160A1Q05DH4 1040 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 ECM1Q16610 540 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 MTERF2Q49AM1 385 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 XKR9Q5GH70 373 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 ZNF484Q5JVG2 852 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 CEP57L1Q8IYX8 460 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 TNS4Q8IZW8 715 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 IQUBQ8NA54 791 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 PIGOQ8TEQ8 1089 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 LARP4BQ92615 738 aaKnown RBP7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 KAT2BQ92831 832 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 DHX58Q96C10 678 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 ABHD8Q96I13 439 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 CEP170P1Q96L14 293 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 CUEDC2Q9H467 287 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 GOLPH3LQ9H4A5 285 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 ANKEF1Q9NU02 776 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 LMBRD1Q9NUN5 540 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 WRAP73Q9P2S5 460 aaPredicted RBP7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 DBR1Q9UK59 544 aaKnown RBP7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 PPME1Q9Y570 386 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 DOCK5Q9H7D0 1870 aa7.36□□□□□ -1.23
CHRNA3-204ENST00000559002 COL1A2P08123 1366 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 NRCAMQ92823 1304 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 A0A087X0B3 334 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 FAM237AA0A1B0GTK4 181 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 TMEM150BA6NC51 233 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 RRN3P2A6NIE6 340 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 HAS3O00219 553 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 USO1O60763 962 aaKnown RBP7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 KINO60870 393 aaKnown RBP7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 EYA4O95677 639 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 MBD3O95983 291 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 KRT18P05783 430 aaKnown RBP7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 PLA2G4BP0C869 781 aa7.35□□□□□ -1.23
CHRNA3-204ENST00000559002 GNAT1P11488 350 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms