RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PDIA3P30101 505 aaKnown RBP15.44■□□□□ 0.06
VPS18-203ENST00000558855 GATMP50440 423 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 STAT5BP51692 787 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 CCT2P78371 535 aaKnown RBP15.44■□□□□ 0.06
VPS18-203ENST00000558855 TSHZ1Q6ZSZ6 1077 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 TMEM192Q8IY95 271 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 APBB2Q92870 758 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 GJA10Q969M2 543 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 SDF4Q9BRK5 362 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 TMX1Q9H3N1 280 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 VPS54Q9P1Q0 977 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 POTEB3A0JP26 581 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 MGEA5O60502 916 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 CYP3A4P08684 503 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 HMGB1P09429 215 aaKnown RBP15.43■□□□□ 0.06
VPS18-203ENST00000558855 TMEM266Q2M3C6 531 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 POTEBQ6S5H4 581 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 MTHFD1LQ6UB35 978 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 NIPA1Q7RTP0 329 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 PLPPR4Q7Z2D5 763 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 FBXL16Q8N461 479 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 TMEM40Q8WWA1 233 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 HLA-CQ95604 372 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 ZNF689Q96CS4 500 aaPredicted RBP15.43■□□□□ 0.06
VPS18-203ENST00000558855 AIFM3Q96NN9 605 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 PPP1R16BQ96T49 567 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 UBE2ZQ9H832 354 aaPredicted RBP15.43■□□□□ 0.06
VPS18-203ENST00000558855 LMCD1Q9NZU5 365 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 PCDHA2Q9Y5H9 948 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 TRPV2Q9Y5S1 764 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 ADGRA3Q8IWK6 1321 aa15.43■□□□□ 0.06
VPS18-203ENST00000558855 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
VPS18-203ENST00000558855 RRN3P2A6NIE6 340 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 H3BNC9 293 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 CSPG5O95196 566 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 EVCP57679 992 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 FGD1P98174 961 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 GPM6BQ13491 265 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 NPY5RQ15761 445 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 REXO1Q8N1G1 1221 aaKnown RBP15.42■□□□□ 0.06
VPS18-203ENST00000558855 SLC26A6Q9BXS9 759 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
VPS18-203ENST00000558855 AZI2Q9H6S1 392 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 HCSTQ9UBK5 93 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 COG5Q9UP83 839 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 IGSF9BQ9UPX0 1349 aa15.42■□□□□ 0.06
VPS18-203ENST00000558855 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
VPS18-203ENST00000558855 GRM6O15303 877 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 IFNAR1P17181 557 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 KLRC1P26715 233 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 CTNNB1P35222 781 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 ZNF76P36508 570 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 UGCGQ16739 394 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 TCEAL5Q5H9L2 206 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 SWSAP1Q6NVH7 229 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.41■□□□□ 0.06
VPS18-203ENST00000558855 MRPL38Q96DV4 380 aaKnown RBP15.41■□□□□ 0.06
VPS18-203ENST00000558855 CELF4Q9BZC1 486 aaKnown RBP15.41■□□□□ 0.06
VPS18-203ENST00000558855 UPF3BQ9BZI7 483 aaKnown RBP15.41■□□□□ 0.06
VPS18-203ENST00000558855 PADI3Q9ULW8 664 aa15.41■□□□□ 0.06
VPS18-203ENST00000558855 ARID2Q68CP9 1835 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 SMIM35A0A1B0GVV1 85 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 BACH1O14867 736 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 ZNF862O60290 1169 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 DGKIO75912 1065 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 C22orf31O95567 290 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 DNAJB1P25685 340 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 CAMK1Q14012 370 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 PRR16Q569H4 304 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 PDXDC2PQ6P474 469 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 TRMT1LQ7Z2T5 733 aaKnown RBP15.4■□□□□ 0.06
VPS18-203ENST00000558855 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 TEX2Q8IWB9 1127 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 KIAA0319LQ8IZA0 1049 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 ATP8B4Q8TF62 1192 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 IL17RAQ96F46 866 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 ZNF577Q9BSK1 485 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 RNF26Q9BY78 433 aaPredicted RBP15.4■□□□□ 0.06
VPS18-203ENST00000558855 ZSWIM6Q9HCJ5 1215 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 ERVK-5Q9HDB9 667 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 ZNF302Q9NR11 478 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 NOC2LQ9Y3T9 749 aaKnown RBP15.4■□□□□ 0.06
VPS18-203ENST00000558855 MRPL42Q9Y6G3 142 aaKnown RBP15.4■□□□□ 0.06
VPS18-203ENST00000558855 KDM3AQ9Y4C1 1321 aa15.4■□□□□ 0.06
VPS18-203ENST00000558855 MSH4O15457 936 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 IL9P15248 144 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 KCNA5P22460 613 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 CIITAP33076 1130 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 GTF2F1P35269 517 aaKnown RBP eCLIP15.39■□□□□ 0.05
VPS18-203ENST00000558855 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
VPS18-203ENST00000558855 RUFY3Q7L099 469 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 FIBCD1Q8N539 461 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 IL27Q8NEV9 243 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 C6orf50Q9HD87 102 aa15.39■□□□□ 0.05
VPS18-203ENST00000558855 MAFBQ9Y5Q3 323 aaPredicted RBP15.39■□□□□ 0.05
VPS18-203ENST00000558855 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
VPS18-203ENST00000558855 C5orf67F2Z3F1 127 aa15.38■□□□□ 0.05
VPS18-203ENST00000558855 H3BQ06 376 aaPredicted RBP15.38■□□□□ 0.05
VPS18-203ENST00000558855 M0R2N6 131 aa15.38■□□□□ 0.05
VPS18-203ENST00000558855 HBP1O60381 514 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms